DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt6

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_998361.1 Gene:galnt6 / 406477 ZFINID:ZDB-GENE-040426-2272 Length:619 Species:Danio rerio


Alignment Length:674 Identity:207/674 - (30%)
Similarity:329/674 - (48%) Gaps:112/674 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RLLRKVVLLLVVIV--TVSLVTTLVVERRMKNAA-----------------ELTEQLDPN----- 50
            ||.|::..|.:.||  |:.::..:|::|.:.:.|                 |:......|     
Zfish     2 RLRRRLSPLKLAIVGGTLFMLILVVLQRDVNSGALQDPWLQDLSNKKERVFEMVRGAVNNFAFQI 66

  Fly    51 GDPITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKG-----ERKDWHDYAAM 110
            |.|:.|   :..:.||        .|||.                 |.|     |.|.|.:    
Zfish    67 GAPVRP---SVEVQPT--------PDRNC-----------------PSGFYTQRELKPWIE---- 99

  Fly   111 EADRKRSGFGEHGVAVKIENPDEKQLEKEHYE---MNGFNGLISDRISVNRSV-PDLRLEACKTR 171
            .........|..||..:.:.. .|:.|||..|   .:.||...|||||::|:: .|.|...|..|
Zfish   100 RPPENPQAPGADGVPFQYDRM-TKEEEKEKQEGMTRHCFNQFASDRISLHRTLGDDTRPPECVDR 163

  Fly   172 KY--LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQ 234
            |:  ...||..|||.:|.||.::||||::|||::.:|...||:|::|||.|..:.|...|::||:
Zfish   164 KFRRCPALPTTSVIIVFHNEAWSTLLRTVYSVLHTSPAAFLKEIIMVDDASTAEHLHGKLEEYVK 228

  Fly   235 QHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCP 299
            .  ..:|.:||.|||:|||.||:.||..|.|:::.|.|:|.|..:.||.||:..|...|.....|
Zfish   229 A--LKIVKVVRQPERKGLITARLLGASKAEGEILTFLDAHCECFHGWLEPLLARIVEEPTAVVSP 291

  Fly   300 MVDTISHEDFSYFSGNKDGA------RGGFDWKMLY--KQLPVLPEDA--LDKSMPYRSPVMMGG 354
            .:.||   |.:.|..:|..|      ||.|||.:.:  :.:|.. |:|  .|::.|.::|...||
Zfish   292 EITTI---DLNTFQFHKPVATARAHNRGNFDWSLTFGWEGIPDY-ENAKRKDETYPVKTPTFAGG 352

  Fly   355 LFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGH 419
            ||:|:..:|..:|.|||:::|||||..|:||::|.|||.|..:|||.|.|:|| ...|...|:|.
Zfish   353 LFSISKAYFEKIGTYDDKMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFR-TKSPHTFPKGT 416

  Fly   420 NFVAKNHKRVAEVWMDEYKQYVYKRD---PKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAP 481
            ..:.:|..|:||||||:||...|:|.   .|.......||::.:..:||.|:||:|.|:::.|.|
Zfish   417 EVITRNQVRLAEVWMDDYKLIFYRRSQSAAKMAKEKGFGDISDRLKLREDLQCKNFSWYLSNVYP 481

  Fly   482 DFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTE--EAVGMFSCADNRTHPQ-PNQFWELSI 543
            :..|  |.:.|..:  |.::| .....||| :|:|..  :.|.|::|     |.. .||::|.:.
Zfish   482 EAFV--PDLSPVKF--GALKN-RGAQQCLD-VGESNNGGKPVIMYTC-----HNMGGNQYFEYTS 535

  Fly   544 FRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGN----QFWYYDRQTQRLVHGENNKRCLEGF 604
            .::||......:||.....|....:.:.:...:|.:    |.|....  ::|:...::.:||.  
Zfish   536 HKELRHNIGKQLCLQASPYPEPVKIELCTLKGKGSSLAPEQEWLITE--EQLLKNPSSGKCLH-- 596

  Fly   605 VENGIAKVVANSCENGNDRQRWEF 628
             :.| .|::.:.|...:..|:|.|
Zfish   597 -KKG-DKILMSPCNPDDHHQQWAF 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 98/245 (40%)
pp-GalNAc-T 181..480 CDD:133004 123/311 (40%)
Ricin_B_lectin 496..626 CDD:279046 29/136 (21%)
RICIN 498..628 CDD:238092 30/136 (22%)
galnt6NP_998361.1 pp-GalNAc-T 175..480 CDD:133004 123/311 (40%)
Ricin_B_lectin 493..616 CDD:279046 29/137 (21%)
RICIN 494..618 CDD:238092 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586976
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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