DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt3

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001015032.2 Gene:Galnt3 / 366061 RGDID:1306443 Length:633 Species:Rattus norvegicus


Alignment Length:688 Identity:220/688 - (31%)
Similarity:345/688 - (50%) Gaps:119/688 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKKRYVKRLLRK------------VVLLLVVIVTVSLVTTL-------VVERRMKNAAELTEQ 46
            ||..||.||..:::            :...|||::.:....::       .:||.:||..::.:.
  Rat     1 MAHLKRLVKLHIKRHYHRKFWKLGAVIFFFLVVLILMQREVSVQYSKEESKMERNLKNKNKMFDF 65

  Fly    47 LDPNGDPITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAME 111
            :      :..|....:..|..:...|..|:    :|:|....|||:              |.|.|
  Rat    66 M------LEAVNNIKDAMPKMQIGAPIKQN----IDVPERPCLQGY--------------YTAAE 106

  Fly   112 ----ADR---KRSGFGEHGVAVKIEN-PDEKQLEKEHYE-MNGFNGLISDRISVNRSV-PDLRLE 166
                .||   ..:..|..|...||.: ..|:|.|||..| .:.||...|||||::|.: ||.|..
  Rat   107 LKPVLDRPPQDSNAPGASGKPFKITHLSPEEQKEKERGETKHCFNAFASDRISLHRDLGPDTRPP 171

  Fly   167 ACKTRKY--LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPL 229
            .|..:|:  ...||..|||.:|.||.::||||:::||:..:|..|||:|:||||.|..|.|.:.|
  Rat   172 ECIEQKFKRCPPLPTTSVIIVFHNEAWSTLLRTVHSVLYSSPAILLKEIILVDDASVDDYLHEKL 236

  Fly   230 DDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPK 294
            ::|::|.  .:|.|||..||:|||.||:.||.||..:.:.|.|:|.|..|.||.||:..||.|..
  Rat   237 EEYIKQF--SIVKIVRQQERKGLITARLLGAAVATAETLTFLDAHCECFYGWLEPLLARIAENYT 299

  Fly   295 ISTCPMVDTISHEDFSYFSGNKDGA------RGGFDWKMLY--KQLPVLPED-ALDKSMPYRSPV 350
            ....|.:.:|   |.:.|..||...      ||.|||.:.:  :.||...:. ..|::.|.::|.
  Rat   300 AVVSPDIASI---DLNTFEFNKPSPYGSNHNRGNFDWSLSFGWESLPDHEKQRRKDETYPIKTPT 361

  Fly   351 MMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGN 415
            ..||||:|:.|:|..:|.||::::|||||..|:||::|.|||.|..:|||.|.|:||. ..|...
  Rat   362 FAGGLFSISRDYFEHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRS-KSPHTF 425

  Fly   416 PRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDA---------GDLTRQRGVRERLKCKS 471
            |:|...:|:|..|:|||||||||:..|:|      |.||         |||:::..:::||:||:
  Rat   426 PKGTQVIARNQVRLAEVWMDEYKEIFYRR------NTDAAKIVKQKSFGDLSKRFEIKKRLQCKN 484

  Fly   472 FHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLD----NMGKSTEEAVGMFSCADNRTH 532
            |.|::..:.|:..|  |.:.|  ..:|.|::|..|: |||    |.|   ::.:.:::|     |
  Rat   485 FTWYLNTIYPEVYV--PDLNP--VISGYIKSVGQPL-CLDVGENNQG---DKPLILYTC-----H 536

  Fly   533 P-QPNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQG------GNQFWYYDRQTQR 590
            . ..||::|.|..|::|......:||...:|    .|.:.:|..:|      |.|.|  :.:..:
  Rat   537 GLGGNQYFEYSAQREIRHNIQKELCLHATQG----VVQLKACVYKGHRTIAPGEQIW--EIRKDQ 595

  Fly   591 LVHGENNKRCLEGFVENGIAKVVANSCENGNDRQRWEF 628
            |::....:.||.   .||....:. .|:..:..|:|.|
  Rat   596 LLYNPLFRMCLS---SNGEHPSLV-PCDTTDLLQKWIF 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 99/244 (41%)
pp-GalNAc-T 181..480 CDD:133004 129/316 (41%)
Ricin_B_lectin 496..626 CDD:279046 33/140 (24%)
RICIN 498..628 CDD:238092 34/140 (24%)
Galnt3NP_001015032.2 pp-GalNAc-T 188..493 CDD:133004 129/316 (41%)
Ricin_B_lectin 506..627 CDD:279046 33/139 (24%)
RICIN 507..629 CDD:238092 34/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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