DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galntl6

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:650 Identity:266/650 - (40%)
Similarity:362/650 - (55%) Gaps:75/650 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KRYVKRLLRKVVLLLVVIV---TVSLVTTLVVERRMKNAAELTEQLDPNGDPITPVFRAANIHPT 66
            ||..||.|:..:|..|.::   .:.|.:....:..||:|.....|..|.|               
  Rat     2 KRKQKRFLQMTLLFTVALIFLPNIGLWSLYKDKHLMKSAEPAEHQTFPLG--------------- 51

  Fly    67 RKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENP 131
                         :.|........|.|       |||||||.:::.|..|||.||||....:...
  Rat    52 -------------LGDGQFYSWTDGLR-------RKDWHDYVSIQKDALRSGKGEHGKPYPLTEE 96

  Fly   132 DEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLR 196
            |.   :...|..||||..:|:.|::.||:||:|...||.:.||.:|||.|:|..|.||.:.:|||
  Rat    97 DH---DDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLR 158

  Fly   197 SIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAK 261
            :|:|:|||||..|:.:|:||||.|:.:.||..|:||:.: || :|.|||..:|:|||..|:.||.
  Rat   159 TIHSIINRTPESLIAEIILVDDFSDREHLKDKLEDYMAR-FP-IVRIVRTKKREGLIRTRLLGAS 221

  Fly   262 VAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWK 326
            ||.|:|:.|.|||.|||.||||||:..||:|.|...|||:|.|.|..|.|.:...|..||.|||:
  Rat   222 VARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHSHFGYEAQAGDAMRGAFDWE 286

  Fly   327 MLYKQLPVLPE-DALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMC 390
            |.||::|:.|| ...|.|.|:.||||.|||||::..:||:|||||..|:||||||||:|||:|||
  Rat   287 MYYKRIPIPPELQRADPSEPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMC 351

  Fly   391 GGMLLDVPCSRVAHIFRG--PMK-PRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNL 452
            ||.:.|||||||.||:|.  |.| |.|..     :|:|.|||||.||||:.:|:|:|.|: |.:|
  Rat   352 GGEMFDVPCSRVGHIYRKYVPYKVPSGTS-----LARNLKRVAETWMDEFAEYIYQRRPE-YRHL 410

  Fly   453 DAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKST 517
            ..||::.|:.:|:|||||.|.|||..||.|....:|||||...|.|.|:|||..: |:|:...:.
  Rat   411 STGDISAQKELRKRLKCKDFKWFMAAVAWDVPKYYPPVEPLPAAWGEIRNVAANL-CVDSKHGAM 474

  Fly   518 EEAVGMFSC---ADNRT--HPQPNQF-WELSI--FRDLRMKGFDSVCLDV--HEGPPNATVWMWS 572
            ...:.:..|   ...||  |.|...| |...|  ...|..:.|   |||.  |..|    |.::.
  Rat   475 GTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKF---CLDAISHSSP----VTLYD 532

  Fly   573 CHSQGGNQFWYYDRQTQRLVHGENNKRCLEGFVENGIAKVVANSCENGNDRQRWEFGFVNHTMLD 637
            ||...|||.|.| |:.:.|.|..:|. |::  ......||....|:..::.|:|.|..:|.|:|:
  Rat   533 CHGMKGNQLWGY-REDRTLFHPVSNS-CMD--CNPAEKKVFMARCDPLSETQQWMFEHINMTVLE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 161/302 (53%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 41/145 (28%)
Galntl6NP_001129228.1 pp-GalNAc-T 143..438 CDD:133004 161/302 (53%)
beta-trefoil_Ricin_GALNTL6 449..594 CDD:467355 47/156 (30%)

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