DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Pgant3

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster


Alignment Length:647 Identity:196/647 - (30%)
Similarity:308/647 - (47%) Gaps:126/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LQG----FRLPEPKGERKD-W-HD------------YAAMEAD-------RKRSGFGEHGVAVKI 128
            :||    .|.|:|..:|:. | |.            :..|.||       :..:|.|..|..|.:
  Fly    37 IQGGDAEMRHPKPPPKRRSLWPHKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVVV 101

  Fly   129 ENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNT 193
            ...|..:::: .:.:|.||.|.||||.:||::.|.|...|:.:||.:.||:.|||.:|.||.::.
  Fly   102 PPRDRFRMQR-FFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSV 165

  Fly   194 LLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQ-QHFPHLVTIVRNPERQGLIGARI 257
            |||:|.|||||:|..|||:|:||||.|:...||:.|:.||: ...|  ..|.|..:|.||:.||:
  Fly   166 LLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVP--TRIFRMKKRSGLVPARL 228

  Fly   258 AGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGG 322
            .||:.|.|.|:.|.|:|.|.:..||.||:..|..:.|:..||::|.||.::||| :...:...|.
  Fly   229 LGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSY-TKTFENHWGA 292

  Fly   323 FDWKMLY------KQLPVLPEDALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQY 381
            |:|::.:      ::.......:.|.:.|..:|.|.||||||:..:|:::|.||..:.:||||..
  Fly   293 FNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENV 357

  Fly   382 ELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFV-AKNHKRVAEVWMDEYKQYV-YKR 444
            |:||:||.|||.:...|||.|.|:||. ..|...|.|.:.| ..|..|.|.||||:::.:: ...
  Fly   358 EMSFRIWQCGGRVEISPCSHVGHVFRS-STPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYT 421

  Fly   445 DPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGII--------- 500
            ...|....|..::|.:..:||||:||.|.|::..:.|:..  ||  .|..:...||         
  Fly   422 SGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHF--FP--APDRFFGKIIWLDGETECA 482

  Fly   501 -------QNVANPVY----------------------------CL----DNMGKSTEEAVGMFSC 526
                   :|:.....                            ||    :::.:|:..||.:..|
  Fly   483 QAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDC 547

  Fly   527 ADNRTHPQPNQFWELSIFRDLRMKG----FDSVCLDVHEGP---------PNAT---VWMWSCHS 575
            .   :|.|....:.::      .||    .|:|||...:..         .|||   |.:..|.|
  Fly   548 T---SHAQSMDMFVIT------PKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCAS 603

  Fly   576 QGGNQFWYYDRQTQRLVHGENNKRC--LEGFVENGIAK----VVANSCENGNDRQRWEFGFV 631
            . .:|.|.||..||::.| .:.|.|  |:....:.:.|    |::..|:..:..|:|  ||:
  Fly   604 D-SSQLWTYDMDTQQISH-RDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKW--GFI 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 97/240 (40%)
pp-GalNAc-T 181..480 CDD:133004 119/307 (39%)
Ricin_B_lectin 496..626 CDD:279046 37/199 (19%)
RICIN 498..628 CDD:238092 38/199 (19%)
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 98/239 (41%)
pp-GalNAc-T 153..457 CDD:133004 119/307 (39%)
Ricin_B_lectin 516..658 CDD:279046 34/152 (22%)
RICIN 524..660 CDD:238092 35/148 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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