DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt11

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001258248.1 Gene:Galnt11 / 311952 RGDID:735097 Length:609 Species:Rattus norvegicus


Alignment Length:630 Identity:213/630 - (33%)
Similarity:322/630 - (51%) Gaps:96/630 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NAAELTEQLDPNGDPITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKD 103
            |.:|:|:.|             .|:......|..||..:    ..||..:..| |:.||:.:...
  Rat    30 NFSEVTQPL-------------RNVPIKGSGPHGPFPKK----FYPRFTRGPG-RVLEPQFKANR 76

  Fly   104 WHDYAAMEADRKRSGFGEHGVAV-KIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEA 167
            ..|......:....|..:....: .|.|..:::|....|:.:.||.|||:|:..:|.|||.|...
  Rat    77 MDDLMNNNIEDPDKGLSKSSSELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAE 141

  Fly   168 CKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDY 232
            |:.:.|...||..||:..|:||.|:.|||:::||::|||..||.:|:||||.|::|.||..||:|
  Rat   142 CRGKSYPTDLPTASVVICFYNEAFSALLRTVHSVVDRTPAHLLHEIILVDDSSDFDDLKGELDEY 206

  Fly   233 VQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKIST 297
            :|::.|..|.::||.:|:|||..|:.||..|.|:|:||.|||.|||..||.||:..|..:|....
  Rat   207 IQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVMWLQPLLAIILEDPHTVV 271

  Fly   298 CPMVDTISHEDFSYFSGNKDGARGGFDWKMLYK--QLPVLPEDALDK-SMPYRSPVMMGGLFAIN 359
            ||::|.||.:..:|.|  ....||||:|.:.:|  .:||......|. :.|.|||.|.|||||:|
  Rat   272 CPVIDIISADTLAYSS--SPVVRGGFNWGLHFKWDLVPVSDLGGADSATAPIRSPTMAGGLFAMN 334

  Fly   360 TDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAK 424
            ..:|.|||.||..:||||||..|:||:||||||.|..:|||||.|||| ..:|.|:|.|.:.:..
  Rat   335 RQYFNDLGQYDSGMDIWGGENLEISFRIWMCGGKLFIIPCSRVGHIFR-KRRPYGSPEGQDTMTH 398

  Fly   425 NHKRVAEVWMDEYKQYVYKRDP----KTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLV 485
            |..|:|.||:||||:..:...|    |::     |:::.:..:|::|.|:||.|::..|.|:..|
  Rat   399 NSLRLAHVWLDEYKEQYFSLRPDLKTKSF-----GNISERVELRKKLGCQSFKWYLDNVYPEMQV 458

  Fly   486 KFP-------------PVEPPSYAAGIIQNVANPVYCLDNMGKSTEEA--VGMFSCADNRTHPQP 535
            ..|             |..|.....|.:.::... .||...|:|:::.  |.:.:|    .:..|
  Rat   459 SGPKARLQQPVFINRGPKRPRVLLRGRLYHLQTN-KCLVAQGRSSQKGGLVLLKAC----DYGDP 518

  Fly   536 NQFWELSIFRDLRMKGFDSVCLDVHE----GPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGEN 596
            .|.|..:...:|.:...  :|||:.|    .||.    :..||..||:|.|.:         |:|
  Rat   519 TQVWIYNEEHELILNNL--LCLDMSETRSSDPPR----LMKCHGSGGSQQWTF---------GKN 568

  Fly   597 NK-------RCL--------EGFVENGIAKVVANSCENGNDRQRW 626
            |:       :||        :|:|...|       |: |:..|:|
  Rat   569 NRLYQVSVGQCLRVVDQMDQKGYVGMAI-------CD-GSSSQQW 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 113/236 (48%)
pp-GalNAc-T 181..480 CDD:133004 137/305 (45%)
Ricin_B_lectin 496..626 CDD:279046 34/150 (23%)
RICIN 498..628 CDD:238092 35/150 (23%)
Galnt11NP_001258248.1 pp-GalNAc-T 155..453 CDD:133004 137/305 (45%)
Glyco_tranf_2_3 155..383 CDD:290369 115/230 (50%)
Ricin_B_lectin 484..605 CDD:279046 34/148 (23%)
RICIN 488..607 CDD:238092 34/146 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346046
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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