DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and Galnt9

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001116116.1 Gene:Galnt9 / 304571 RGDID:1311523 Length:604 Species:Rattus norvegicus


Alignment Length:670 Identity:211/670 - (31%)
Similarity:323/670 - (48%) Gaps:121/670 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKKRYVKRLLRKVVLLLVVIVTVSLVTTL---------VV---ERRMKN----AAELTEQLDP 49
            ||:.:: :|.||...:|:.|.|:..|:...|         ||   :|||:|    |:.||     
  Rat     1 MAVARK-IKTLLTVNILVFVGIILFSVYCRLQDRSEALVQVVRGADRRMRNRLSKASALT----- 59

  Fly    50 NGDPITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADR 114
                                      ||.::  :.|.|.|:.....:..|..|   ....:|.. 
  Rat    60 --------------------------DREAI--LQRLDHLEEVVYNQLNGLAK---PIGLVEGP- 92

  Fly   115 KRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPN 179
              .|.|:.|||..::  |:.|..:..:|..|:|..:|||||::|::||.|.:.|:...|...||.
  Rat    93 --GGLGQGGVAATLQ--DDSQETEGKFEDFGYNAQLSDRISLDRTIPDYRPKRCRQITYSEDLPQ 153

  Fly   180 ISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIV 244
            |||:|||.||..:.:|||::||:|.||.:|||:|:||||.|:...||..||.||.:.:|.||.:|
  Rat   154 ISVVFIFVNEALSVILRSVHSVVNHTPSQLLKEIILVDDNSDNVELKFNLDQYVHKRYPGLVKVV 218

  Fly   245 RNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDF 309
            ||..|:|||.||:.|.|||...::.|||:|:|.|..|..|.:..|..:.:....|.:|.|.:..|
  Rat   219 RNSRREGLIRARLQGWKVATAPIVGFFDAHVEFNTGWAEPALARIQEDRRRIILPAIDNIKYSTF 283

  Fly   310 ---SYFSGNKDGARGGFDWKMLYKQLPVLPEDALDK---SMPYRSPVMMGGLFAINTDFFWDLGG 368
               .|.|     |..|::|. |:....:.|:|.||:   |.|.|:|.|:|..|.::.::|.|:|.
  Rat   284 EVQQYAS-----AAHGYNWG-LWCMYIIPPQDWLDRGDESAPIRTPAMIGCSFVVDREYFGDIGL 342

  Fly   369 YDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVW 433
            .|..::::|.|..||..::|.|||.:..:||||||||.| ..||..|...: :..:|..|.||||
  Rat   343 LDPGMEVYGAENIELGMRVWQCGGSMEVLPCSRVAHIER-TKKPYNNDIDY-YAKRNALRAAEVW 405

  Fly   434 MDEYKQYVYK--RDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYA 496
            ||::|.:||.  ..|.|...:|.||::.:..:|::|||:||.|::..|.|:.     .:...:..
  Rat   406 MDDFKSHVYMAWNIPMTNPGVDFGDVSERLALRQKLKCRSFKWYLENVYPEM-----RIYNNTLT 465

  Fly   497 AGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQPNQFWELSIFRDLRMKGF-------DS 554
            .|.::|.....||||...:..:.|: ::.|     |...:|....|....|::...       ||
  Rat   466 YGEVRNSKASGYCLDQGAEDDDRAI-LYPC-----HGMSSQLVRYSADGLLQLGPLGSTAFLPDS 524

  Fly   555 VCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRL--------VHGENNKRCLEGFVE----- 606
            .|| |.:|...... :..|....        |.||||        :...:..||||  ||     
  Rat   525 KCL-VDDGRGRMPT-LKKCEDVA--------RPTQRLWDFTQSGPIVSRDTGRCLE--VEMSKDA 577

  Fly   607 NGIAKVVANSCENGNDRQRW 626
            |...::|...|..    |:|
  Rat   578 NFGLRLVVQRCSG----QKW 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 123/306 (40%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 35/154 (23%)
Galnt9NP_001116116.1 pp-GalNAc-T 155..454 CDD:133004 123/306 (40%)
beta-trefoil_Ricin_GALNT9 457..601 CDD:467351 35/164 (21%)

Return to query results.
Submit another query.