DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt18

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:613 Identity:183/613 - (29%)
Similarity:285/613 - (46%) Gaps:132/613 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PRSDKLQGFRLPEPKG------ERKDWH----------------DYAAMEADRKRSGFGEHGVAV 126
            |..||    :|.|.||      ||.| |                :.|..|.....|.|...|..:
  Rat    46 PAPDK----KLEEDKGDTLKIIERLD-HLENVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWGQEL 105

  Fly   127 KIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHF 191
               :|:.:::..:.::..|:|..:|||:.::|.:||||...|:...:...||.:|::|||.||..
  Rat   106 ---SPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGCRNLSFPDSLPEVSIVFIFVNEAL 167

  Fly   192 NTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQ---HFPHLVTIVRNPERQGLI 253
            :.|||||:|.:.|||..|||:|:||||.|..:.||:.|.:||.:   ..|..:.:||:.:::|||
  Rat   168 SVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLTEYVDKVNGQKPGFIKVVRHSKQEGLI 232

  Fly   254 GARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDG 318
            .:|::|.:.|...|:..||:|:|.|..|..|::..|..|.|....|..|.|.:::|..  .....
  Rat   233 RSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEI--EEYPL 295

  Fly   319 ARGGFDWKMLYKQLPVLPEDA---LDKS-MPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGE 379
            |..||||::..:.|.  |..|   |:.| .|.|||.:: |.|.::..:|.::|..|:.::::|||
  Rat   296 AAQGFDWELWCRYLN--PPKAWWKLENSTAPIRSPALI-GCFIVDRQYFEEIGLLDEGMEVYGGE 357

  Fly   380 QYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYK- 443
            ..||..::|.|||.:..:||||:|||.|.......:...|  |.:|..|||||||||:|.:||. 
  Rat   358 NVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAH--VRRNALRVAEVWMDEFKSHVYMA 420

  Fly   444 -RDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPV 507
             ..|:....:|.||:|.::.:|::|:||:|.|::..|.|:..:....:     |.|::||.....
  Rat   421 WNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMRMYSDII-----AYGVLQNSLKTD 480

  Fly   508 YCLDNMGKSTEEAVGMFSC---------------------------ADNRTHPQPN---QFWELS 542
            .|.| .|..||....::.|                           .|||.....|   :..|.|
  Rat   481 LCFD-QGPDTENVPIVYICHGMTPQNVYYTSSQQIHVGVLSPTIDDDDNRCLVDVNSRPRLIECS 544

  Fly   543 IFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLE----- 602
            ..:..|||        :|        |.:   ||||:            :....:|||||     
  Rat   545 YAKAKRMK--------LH--------WQF---SQGGS------------IQNRKSKRCLELQENS 578

  Fly   603 ----GFVENGIAKVVANSCENGNDRQRW 626
                ||      ::|...|..    |.|
  Rat   579 DMEFGF------QLVLQKCSG----QHW 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 87/240 (36%)
pp-GalNAc-T 181..480 CDD:133004 115/307 (37%)
Ricin_B_lectin 496..626 CDD:279046 35/168 (21%)
RICIN 498..628 CDD:238092 35/168 (21%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 115/307 (37%)
Ricin_B_lectin 469..596 CDD:279046 35/168 (21%)
RICIN 471..598 CDD:238092 35/168 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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