DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt2

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:554 Identity:179/554 - (32%)
Similarity:286/554 - (51%) Gaps:52/554 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GERKDWHDYAAM-EADRKRSGFGEHGVAV------KIENPDEKQ----------LEKEHYEMNGF 146
            |.:.||:|..:: :.|...|...|...::      |:..||..|          ..::.|..|.|
  Rat    39 GRKGDWNDIDSIKKKDLHHSRGDEKAQSMETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKF 103

  Fly   147 NGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLK 211
            |.:.||::.::||:||.|.:.|:.:::...||..||:..|.||..:.|||::.||:.|:||.|:|
  Rat   104 NQVESDKLRMDRSIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIK 168

  Fly   212 QIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIE 276
            :|:||||.|     ..|.|..:.... ..|.::||..|:||:.:|:.||..|..:|:.|.|||.|
  Rat   169 EIILVDDYS-----NDPEDGALLGKI-EKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCE 227

  Fly   277 VNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDALD 341
            .|..||.||:|.:|.:......|::|.|:.::|.|...:.| .:|||||.:::|...:.||....
  Rat   228 CNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASAD-LKGGFDWNLVFKWDYMTPEQRRS 291

  Fly   342 KS----MPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRV 402
            :.    .|.::|::.||||.::..:|.:||.||..:|:||||..|:||::|.|||.|..:|||||
  Rat   292 RQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRV 356

  Fly   403 AHIFRGPMKPRGNPRGHNFV-AKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRER 466
            .|:|| ...|...|.|...| |:|.:|.|||||||:|.:.|...|.. .|:..|::..:..:|::
  Rat   357 GHVFR-KQHPYTFPGGSGTVFARNTRRAAEVWMDEFKHFYYAAVPSA-RNVPYGNIQSRLELRKK 419

  Fly   467 LKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRT 531
            |.||.|.|::..|.|:..|.    :....|.|.:|...|   |||.:|...:..||::.|    .
  Rat   420 LGCKPFKWYLDNVYPELRVP----DHQDIAFGALQQGTN---CLDTLGHFADGVVGIYEC----H 473

  Fly   532 HPQPNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGEN 596
            :...||.|.|:  ::..:|..| :||.|.:..|.:.:.:..|......|.|.......:|.|..:
  Rat   474 NAGGNQEWALT--KEKSVKHMD-LCLTVVDRSPGSLIRLQGCRENDSRQKWEQIEGNSKLRHVGS 535

  Fly   597 NKRCLEGFV--ENGIAKVVANSCENGNDRQRWEF 628
            | .||:...  ..|::..|.....:    |:|:|
  Rat   536 N-LCLDSRTAKSGGLSVEVCGPALS----QQWKF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 90/237 (38%)
pp-GalNAc-T 181..480 CDD:133004 117/303 (39%)
Ricin_B_lectin 496..626 CDD:279046 32/131 (24%)
RICIN 498..628 CDD:238092 32/131 (24%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 117/303 (39%)
Ricin_B_lectin 445..562 CDD:395527 32/131 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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