DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt2

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001099666.2 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:554 Identity:179/554 - (32%)
Similarity:286/554 - (51%) Gaps:52/554 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GERKDWHDYAAM-EADRKRSGFGEHGVAV------KIENPDEKQ----------LEKEHYEMNGF 146
            |.:.||:|..:: :.|...|...|...::      |:..||..|          ..::.|..|.|
  Rat    39 GRKGDWNDIDSIKKKDLHHSRGDEKAQSMETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKF 103

  Fly   147 NGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLK 211
            |.:.||::.::||:||.|.:.|:.:::...||..||:..|.||..:.|||::.||:.|:||.|:|
  Rat   104 NQVESDKLRMDRSIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIK 168

  Fly   212 QIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIE 276
            :|:||||.|     ..|.|..:.... ..|.::||..|:||:.:|:.||..|..:|:.|.|||.|
  Rat   169 EIILVDDYS-----NDPEDGALLGKI-EKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCE 227

  Fly   277 VNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDALD 341
            .|..||.||:|.:|.:......|::|.|:.::|.|...:.| .:|||||.:::|...:.||....
  Rat   228 CNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASAD-LKGGFDWNLVFKWDYMTPEQRRS 291

  Fly   342 KS----MPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRV 402
            :.    .|.::|::.||||.::..:|.:||.||..:|:||||..|:||::|.|||.|..:|||||
  Rat   292 RQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRV 356

  Fly   403 AHIFRGPMKPRGNPRGHNFV-AKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRER 466
            .|:|| ...|...|.|...| |:|.:|.|||||||:|.:.|...|.. .|:..|::..:..:|::
  Rat   357 GHVFR-KQHPYTFPGGSGTVFARNTRRAAEVWMDEFKHFYYAAVPSA-RNVPYGNIQSRLELRKK 419

  Fly   467 LKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRT 531
            |.||.|.|::..|.|:..|.    :....|.|.:|...|   |||.:|...:..||::.|    .
  Rat   420 LGCKPFKWYLDNVYPELRVP----DHQDIAFGALQQGTN---CLDTLGHFADGVVGIYEC----H 473

  Fly   532 HPQPNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGEN 596
            :...||.|.|:  ::..:|..| :||.|.:..|.:.:.:..|......|.|.......:|.|..:
  Rat   474 NAGGNQEWALT--KEKSVKHMD-LCLTVVDRSPGSLIRLQGCRENDSRQKWEQIEGNSKLRHVGS 535

  Fly   597 NKRCLEGFV--ENGIAKVVANSCENGNDRQRWEF 628
            | .||:...  ..|::..|.....:    |:|:|
  Rat   536 N-LCLDSRTAKSGGLSVEVCGPALS----QQWKF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 117/303 (39%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 34/138 (25%)
Galnt2NP_001099666.2 pp-GalNAc-T 138..433 CDD:133004 117/303 (39%)
beta-trefoil_Ricin_GALNT2 445..564 CDD:467312 33/133 (25%)

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