DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and Galntl6

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_017168336.2 Gene:Galntl6 / 270049 MGIID:1913581 Length:695 Species:Mus musculus


Alignment Length:658 Identity:261/658 - (39%)
Similarity:361/658 - (54%) Gaps:91/658 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KRYVKRLLRKVVLLLVVIVTVSLV--TTLVVERRMKNAAELTEQLDPNGDPITPVFRAANIHPTR 67
            ||..||.|:..:|..|.::.:..:  .:|..::.:..:||..|.                     
Mouse    96 KRKQKRFLQMTLLFTVALIFLPNIGLWSLYKDKHLVKSAEPAEH--------------------- 139

  Fly    68 KAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGE---------RKDWHDYAAMEADRKRSGFGEHG 123
                                  |.|.|....|:         |||||||.:::.|..|||.||||
Mouse   140 ----------------------QTFPLGLGDGQFYSWTDGLRRKDWHDYESIQRDALRSGKGEHG 182

  Fly   124 VAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFN 188
            ....:...|.   :...|..||||..:|:.|::.||:||:|...||.:.||.:|||.|:|..|.|
Mouse   183 KPYPLTEEDR---DDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHN 244

  Fly   189 EHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLI 253
            |.:.:|||:|:|:|||||..|:.:|:||||.|:.:.||..|:||:.:.  ..|.|||..:|:|||
Mouse   245 EGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKDKLEDYMARF--SKVRIVRTKKREGLI 307

  Fly   254 GARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDG 318
            ..|:.||.||.|:|:.|.|||.|||.||||||:..||:|.|...|||:|.|.|..|.|.:...|.
Mouse   308 RTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDA 372

  Fly   319 ARGGFDWKMLYKQLPVLPE-DALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYE 382
            .||.|||:|.||::|:.|| ...|.|.|:.||||.|||||::..:||:|||||..|:||||||||
Mouse   373 MRGAFDWEMYYKRIPIPPELQRADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYE 437

  Fly   383 LSFKIWMCGGMLLDVPCSRVAHIFRG--PMK-PRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKR 444
            :|||:|||||.:.|||||||.||:|.  |.| |.|..     :|:|.|||||.||||:.:|:|:|
Mouse   438 ISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTS-----LARNLKRVAETWMDEFAEYIYQR 497

  Fly   445 DPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYC 509
            .|: |.:|..||::.|:.:|:|||||.|.|||..||.|....:|||||...|.|.|::||..: |
Mouse   498 RPE-YRHLSTGDISAQKELRKRLKCKDFKWFMAAVAWDVPKYYPPVEPLPAAWGEIRSVAANL-C 560

  Fly   510 LDNMGKSTEEAVGMFSC---ADNRT--HPQPNQF-WELSI--FRDLRMKGFDSVCLDV--HEGPP 564
            :|:...:|...:.:..|   ...||  |.|...| |...|  ...|..:.|   |||.  |..| 
Mouse   561 VDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKF---CLDAISHSSP- 621

  Fly   565 NATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLEGFVENGIAKVVANSCENGNDRQRWEFG 629
               |.::.||...|||.|.| |:.:.|.|..:|. |::  ......|:....|:..::.|:|.|.
Mouse   622 ---VTLYDCHGMKGNQLWGY-REDRTLFHPVSNS-CMD--CNPSEKKIFMARCDPLSETQQWIFE 679

  Fly   630 FVNHTMLD 637
            .:|.|:|:
Mouse   680 HINMTVLE 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 159/302 (53%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 40/145 (28%)
Galntl6XP_017168336.2 pp-GalNAc-T 237..532 CDD:133004 159/302 (53%)
beta-trefoil_Ricin_GALNTL6 543..688 CDD:467355 46/157 (29%)

Return to query results.
Submit another query.