DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and GALNT1

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001371367.1 Gene:GALNT1 / 2589 HGNCID:4123 Length:559 Species:Homo sapiens


Alignment Length:553 Identity:216/553 - (39%)
Similarity:318/553 - (57%) Gaps:55/553 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFN 147
            :|..|.|:..:.|         |:           |.||.|..|.|...|:::: ||.:::|.||
Human    42 LPAGDVLEPVQKP---------HE-----------GPGEMGKPVVIPKEDQEKM-KEMFKINQFN 85

  Fly   148 GLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQ 212
            .:.|:.|::|||:||:|||.|||:.|...||..||:.:|.||.::||||:::|||||:|..::::
Human    86 LMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEE 150

  Fly   213 IVLVDDGSEWDVLKQPLDDYVQQ-HFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIE 276
            ||||||.||.|.||:||:.||:: ..|  |.::|..:|.|||.||:.||.|:.|||:.|.|:|.|
Human   151 IVLVDDASERDFLKRPLESYVKKLKVP--VHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCE 213

  Fly   277 VNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL- 340
            ....||.||:..|..:.:...||::|.||.:.|.|.:|: |...|||:||:.::..|| |:..: 
Human   214 CTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGS-DMTYGGFNWKLNFRWYPV-PQREMD 276

  Fly   341 ----DKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSR 401
                |:::|.|:|.|.||||:|:.|:|.::|.||..:||||||..|:||:||.|||.|..|.||.
Human   277 RRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH 341

  Fly   402 VAHIFRGPMKPRGNPRG-HNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRE 465
            |.|:|| ...|...|.| ...:.||::|:|||||||:|.:.|...|.. ..:|.||::.:.|:|.
Human   342 VGHVFR-KATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV-TKVDYGDISSRVGLRH 404

  Fly   466 RLKCKSFHWFMTEVAPDFLVKFPPVEPPSY-AAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADN 529
            :|:||.|.|::..:.||..:      |..| :.|.|:||... .|||||.:...|.||:|:|   
Human   405 KLQCKPFSWYLENIYPDSQI------PRHYFSLGEIRNVETN-QCLDNMARKENEKVGIFNC--- 459

  Fly   530 RTHPQ-PNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVH 593
              |.. .||.:..:..:::|.   |.:||||.:  .|..|.|..||...|||.|.||.....|.|
Human   460 --HGMGGNQVFSYTANKEIRT---DDLCLDVSK--LNGPVTMLKCHHLKGNQLWEYDPVKLTLQH 517

  Fly   594 GENNKRCLEGFVENGIAKVVANSCENGNDRQRW 626
             .|:.:||:...|..........| ||:..|:|
Human   518 -VNSNQCLDKATEEDSQVPSIRDC-NGSRSQQW 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 109/239 (46%)
pp-GalNAc-T 181..480 CDD:133004 134/305 (44%)
Ricin_B_lectin 496..626 CDD:279046 44/130 (34%)
RICIN 498..628 CDD:238092 45/130 (35%)
GALNT1NP_001371367.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..65 8/39 (21%)
Catalytic subdomain A 115..225 55/111 (50%)
pp-GalNAc-T 119..419 CDD:133004 134/305 (44%)
Catalytic subdomain B 285..347 34/61 (56%)
Ricin_B_lectin 432..548 CDD:395527 44/128 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.