DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt17

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_660253.2 Gene:Galnt17 / 212996 MGIID:2137594 Length:598 Species:Mus musculus


Alignment Length:564 Identity:185/564 - (32%)
Similarity:272/564 - (48%) Gaps:120/564 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 GFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISV 182
            |.|:.|:...: :|.|::..|..:|..|:|..:|::||::||:||.|...||..||..:||.||:
Mouse    93 GRGKGGLPATL-SPSEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYSKELPQISI 156

  Fly   183 IFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNP 247
            ||||.||..:.:|||::|.:|.||..|||:|:||||.|:.:.||.||::||.:.:|.||.:|||.
Mouse   157 IFIFVNEALSVILRSVHSAVNHTPTHLLKEIILVDDNSDEEELKAPLEEYVHKRYPGLVKVVRNQ 221

  Fly   248 ERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYF 312
            :|:|||.|||.|.|.|.|||..|||:|:|....|..|::..|..|.|....|.:|.|..::|.. 
Mouse   222 KREGLIRARIEGWKAATGQVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEV- 285

  Fly   313 SGNKDGARGGFDWKM--LYKQLPVLPEDALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDI 375
             ...:.:..|:.|::  :|...|....||.|.|:|.|:|.|:|..|.:|..||.::|..|..:|:
Mouse   286 -QRYENSAHGYSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDV 349

  Fly   376 WGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQY 440
            :|||..||..|:|:|||.:..:||||||||.| ..||..:..|. :..:|..||||||||:||.:
Mouse   350 YGGENIELGIKVWLCGGSMEVLPCSRVAHIER-KKKPYNSNIGF-YTKRNALRVAEVWMDDYKSH 412

  Fly   441 VY--KRDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNV 503
            ||  ...|.....:|.||::.::.:|:.||||:|.|::..|                        
Mouse   413 VYIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHV------------------------ 453

  Fly   504 ANPVYCLDNMGKSTEEAVGMFSCADNRTHPQPNQFWELSIFRDLRMKGFDSVCLDVHEGP-PNAT 567
                                        :|:..::.....:.:||......||||  :|| .|.|
Mouse   454 ----------------------------YPEMRRYNNTIAYGELRNNKAKDVCLD--QGPLENHT 488

  Fly   568 VWMWSCHSQGGNQFWY-----------------------YDRQTQRL------------------ 591
            ..::.||..|.....|                       .|....||                  
Mouse   489 AILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCLVDNSKSRLPQLLDCDKVKSSLYKRWN 553

  Fly   592 ------VHGENNKRCLEGFVEN-GIAKV--VANSCENGNDRQRW 626
                  :..:...||||  ||| |:|.:  :..||..    |||
Mouse   554 FIQNGAIMNKGTGRCLE--VENRGLAGIDLILRSCTG----QRW 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 102/235 (43%)
pp-GalNAc-T 181..480 CDD:133004 128/302 (42%)
Ricin_B_lectin 496..626 CDD:279046 30/180 (17%)
RICIN 498..628 CDD:238092 32/180 (18%)
Galnt17NP_660253.2 Catalytic subdomain A 151..262 58/110 (53%)
pp-GalNAc-T 155..454 CDD:133004 129/354 (36%)
Catalytic subdomain B 319..381 30/61 (49%)
RICIN 467..593 CDD:238092 31/133 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842572
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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