DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and gly-3

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_498722.1 Gene:gly-3 / 176112 WormBaseID:WBGene00001628 Length:612 Species:Caenorhabditis elegans


Alignment Length:638 Identity:212/638 - (33%)
Similarity:332/638 - (52%) Gaps:77/638 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLRKVVLLLVVIVTVSLVTTLVVERRMKNAAELTEQL--------DPNGDPITPVFRAANIHPTR 67
            |:..|:|...:..:.|.......:.|:.|.|...|.|        ||:..||.|..:...::|  
 Worm    24 LIDVVILFYYLDPSTSQQQPFPEDNRILNRARRIEPLPPAAQHDSDPDAHPIQPEKQEKQVYP-- 86

  Fly    68 KAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPD 132
                         ||...:::|:  :|.|.:.....:|            |.|..||.|.   .|
 Worm    87 -------------VDKETANQLR--KLMETQAFGPGYH------------GQGGTGVTVP---ED 121

  Fly   133 EKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKT---RKYLAKLPNISVIFIFFNEHFNTL 194
            :|.::::.:..|.||.:.|:.|||||::||.|.:||:|   ....|.:|..|:|.:|.||.:.||
 Worm   122 KKTIKEKRFLENQFNVVASEMISVNRTLPDYRSDACRTSGNNLKTAGMPKTSIIIVFHNEAWTTL 186

  Fly   195 LRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAG 259
            ||:::|||||:|..||::|:||||.|:.|.|.:|||.|::. ||..:.:|....|.|||.||:.|
 Worm   187 LRTLHSVINRSPRHLLEEIILVDDKSDRDYLVKPLDSYIKM-FPIPIHLVHLENRSGLIRARLTG 250

  Fly   260 AKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFD 324
            :::|.|::::|.|:|:||...||.||:..:|.:.|....|::|.||.:.|.|.:.: :...|||:
 Worm   251 SEMAKGKILLFLDAHVEVTDGWLEPLVSRVAEDRKRVVAPIIDVISDDTFEYVTAS-ETTWGGFN 314

  Fly   325 WKMLYKQLPVLPEDAL-----DKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELS 384
            |.:.::...| |:..|     |:|||.::|.:.||||||:..||:|:|.||:.:.:||||..|:|
 Worm   315 WHLNFRWYAV-PKRELNRRGSDRSMPIQTPTIAGGLFAIDKQFFYDIGSYDEGMQVWGGENLEIS 378

  Fly   385 FKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRG-HNFVAKNHKRVAEVWMDEYKQYVYKRDPKT 448
            |::|||||.|...|||||.|:|| ...|...|.| ...:..|..|.|||||||||.:.||..|..
 Worm   379 FRVWMCGGSLEIHPCSRVGHVFR-KQTPYTFPGGTAKVIHHNAARTAEVWMDEYKAFFYKMVPAA 442

  Fly   449 YDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNM 513
             .|::|||::.::.:||.|:||||.|::..:.|:     .|:.....:.|.|.|.... .|:|..
 Worm   443 -RNVEAGDVSERKKLRETLQCKSFKWYLENIYPE-----APLPADFRSLGAIVNRFTE-KCVDTN 500

  Fly   514 GKSTEEAVGMFSCADNRTH-PQPNQFWELSIFRDLRMKGFDSVCLD---VHEGPPNATVWMWSCH 574
            ||...:|.|:.:|     | ...||.|.|:...::|.   |.:||.   |::......:...|..
 Worm   501 GKKDGQAPGIQAC-----HGAGGNQAWSLTGKGEIRS---DDLCLSSGHVYQIGSELKLERCSVS 557

  Fly   575 SQGGNQFWYYDRQTQRLVHGENNKRCLEGFVENGIAKVVANSCENGNDRQRWE 627
            .......:.:|.|...|:|.:..| |:.|..:    :|..:.|..|...|.|:
 Worm   558 KINVKHVFVFDDQAGTLLHKKTGK-CVTGADQ----RVTLDECGLGRKDQMWQ 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 132/304 (43%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 33/139 (24%)
gly-3NP_498722.1 pp-GalNAc-T 173..473 CDD:133004 132/304 (43%)
beta-trefoil_Ricin_GALNT1-like 481..608 CDD:467311 33/139 (24%)

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