DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt4

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_056552.1 Gene:Galnt4 / 14426 MGIID:894692 Length:578 Species:Mus musculus


Alignment Length:556 Identity:194/556 - (34%)
Similarity:293/556 - (52%) Gaps:47/556 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIE-NPDEKQLEKEHYEMNGFNGLISDRISV 156
            |||:.....:|......::........||.|.|.|:: |..|.:.::|..|....|..:|||||:
Mouse    48 RLPDLDTREEDLSQPLYIKPPADSHALGEWGRASKLQLNEGELKQQEELIERYAINIYLSDRISL 112

  Fly   157 NRSVPDLRLEACKTRKY-LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGS 220
            :|.:.|.|:..||.:|: ...||..|||..|:||.::||||:|:||:..:|..|||:|:||||.|
Mouse   113 HRHIEDKRMYECKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLS 177

  Fly   221 EWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPL 285
            :...||..|:.|:..  ...|.::|..:|:||:.||:.||..|.|.|:.|.|.|.|.|..||.||
Mouse   178 DRIYLKAQLETYISN--LERVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPL 240

  Fly   286 IEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDALDKSM----PY 346
            :|.|:.:.....||::|||....|.::....:...|||||::.: |...:|:...|:..    |.
Mouse   241 LERISRDETAIVCPVIDTIDWNTFEFYMQTGEPMIGGFDWRLTF-QWHSVPKHERDRRTSRIDPI 304

  Fly   347 RSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMK 411
            |||.|.|||||::..:|..||.||..:::||||..||||::|.|||.|...|||.|.|:|  |.:
Mouse   305 RSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVF--PKR 367

  Fly   412 -PRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDP----KTYDNLDAGDLTRQRGVRERLKCKS 471
             |...|   ||: :|..|.|||||||||::.|.|:|    :.|     |||:.::.:||||||||
Mouse   368 APYARP---NFL-QNTARAAEVWMDEYKEHFYNRNPPARKEAY-----GDLSERKLLRERLKCKS 423

  Fly   472 FHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNM---GKSTEEAVGMFSCADNRTHP 533
            |.|::..|..:..|   |.:.|.: .|.|:::.....|||..   ...|...:.:|.|     |.
Mouse   424 FDWYLKNVFSNLHV---PEDRPGW-HGAIRSMGISSECLDYNAPDNNPTGANLSLFGC-----HG 479

  Fly   534 Q-PNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQG----GNQFWYYDRQTQRLVH 593
            | .|||:|.:..:::|......:|.:|.:  ....|.|.:|...|    .|..|:: ::...:.|
Mouse   480 QGGNQFFEYTSNKEIRFNSVTELCAEVPQ--QKDYVGMQNCPKDGLPVPVNIIWHF-KEDGTIFH 541

  Fly   594 GENNKRCLEGF-VENGIAKVVANSCENGNDRQRWEF 628
             .:.:.||..: ...|...|...:|:..:..|.|.|
Mouse   542 -PHTRLCLSAYRTAEGRPSVHMKTCDALDKNQLWRF 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 99/238 (42%)
pp-GalNAc-T 181..480 CDD:133004 131/307 (43%)
Ricin_B_lectin 496..626 CDD:279046 30/138 (22%)
RICIN 498..628 CDD:238092 31/138 (22%)
Galnt4NP_056552.1 WcaA 133..430 CDD:223539 133/310 (43%)
Catalytic subdomain A 134..243 50/110 (45%)
pp-GalNAc-T 138..432 CDD:133004 131/307 (43%)
Catalytic subdomain B 303..365 34/63 (54%)
RICIN 446..576 CDD:238092 31/138 (22%)
Ricin_B_lectin 446..574 CDD:279046 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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