DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and Galnt3

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_056551.2 Gene:Galnt3 / 14425 MGIID:894695 Length:633 Species:Mus musculus


Alignment Length:704 Identity:218/704 - (30%)
Similarity:339/704 - (48%) Gaps:151/704 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKKRYVKRLLRK------------VVLLLVVIVTVSLVTTL-------VVERRMKN------- 39
            ||..||.||..:::            :...|||::.:....::       .:||.:||       
Mouse     1 MAHLKRLVKLHIKRHYHRKFWKLGAVIFFFLVVLILMQREVSVQYSKEESKMERNLKNKNKMLDF 65

  Fly    40 -----------------AAELTEQLDPNGDP-ITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRS 86
                             .|.:.|.:|....| :...:.||.:.|.  ..||| ||.|:.      
Mouse    66 MLEAVNNIKDAMPKMQIGAPIKENIDVRERPCLQGYYTAAELKPV--FDRPP-QDSNAP------ 121

  Fly    87 DKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIEN-PDEKQLEKEHYE-MNGFNGL 149
                                             |..|...||.: ..|:|.|||..| .:.||..
Mouse   122 ---------------------------------GASGKPFKITHLSPEEQKEKERGETKHCFNAF 153

  Fly   150 ISDRISVNRSV-PDLRLEACKTRKY--LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLK 211
            .|||||::|.: ||.|...|..:|:  ...||..|||.:|.||.::||||:::||:..:|..|||
Mouse   154 ASDRISLHRDLGPDTRPPECIEQKFKRCPPLPTTSVIIVFHNEAWSTLLRTVHSVLYSSPAILLK 218

  Fly   212 QIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIE 276
            :|:||||.|..|.|.:.|::|::|.  .:|.|||..||:|||.||:.||.||..:.:.|.|:|.|
Mouse   219 EIILVDDASVDDYLHEKLEEYIKQF--SIVKIVRQQERKGLITARLLGAAVATAETLTFLDAHCE 281

  Fly   277 VNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGA------RGGFDWKMLY--KQLP 333
            ..|.||.||:..||.|......|.:.:|   |.:.|..||...      ||.|||.:.:  :.||
Mouse   282 CFYGWLEPLLARIAENYTAVVSPDIASI---DLNTFEFNKPSPYGSNHNRGNFDWSLSFGWESLP 343

  Fly   334 VLPED-ALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDV 397
            ...:. ..|::.|.::|...||||:|:..:|..:|.||::::|||||..|:||::|.|||.|..:
Mouse   344 DHEKQRRKDETYPIKTPTFAGGLFSISKKYFEHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIM 408

  Fly   398 PCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDA-------- 454
            |||.|.|:||. ..|...|:|...:|:|..|:|||||||||:..|:|      |.||        
Mouse   409 PCSVVGHVFRS-KSPHTFPKGTQVIARNQVRLAEVWMDEYKEIFYRR------NTDAAKIVKQKS 466

  Fly   455 -GDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTE 518
             |||:::..:::||:||:|.|::..:.|:..|  |.:.|  ..:|.|::|..|: ||| :|::.:
Mouse   467 FGDLSKRFEIKKRLQCKNFTWYLNTIYPEAYV--PDLNP--VISGYIKSVGQPL-CLD-VGENNQ 525

  Fly   519 --EAVGMFSCADNRTHP-QPNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQG--- 577
              :.:.:::|     |. ..||::|.|..|::|......:||...:|    .|.:.:|..:|   
Mouse   526 GGKPLILYTC-----HGLGGNQYFEYSAQREIRHNIQKELCLHATQG----VVQLKACVYKGHRT 581

  Fly   578 ---GNQFWYYDRQTQRLVHGENNKRCLEGFVENGIAKVVANSCENGNDRQRWEF 628
               |.|.|  :.:..:|::....|.||.   .||....:. .|:..:..|:|.|
Mouse   582 IAPGEQIW--EIRKDQLLYNPLFKMCLS---SNGEHPNLV-PCDATDLLQKWIF 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 98/244 (40%)
pp-GalNAc-T 181..480 CDD:133004 128/316 (41%)
Ricin_B_lectin 496..626 CDD:279046 33/138 (24%)
RICIN 498..628 CDD:238092 34/138 (25%)
Galnt3NP_056551.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..145 15/72 (21%)
WcaA 184..>302 CDD:223539 56/119 (47%)
Catalytic subdomain A 184..293 53/110 (48%)
pp-GalNAc-T 188..493 CDD:133004 128/316 (41%)
Catalytic subdomain B 356..418 29/61 (48%)
Ricin_B_lectin 506..627 CDD:279046 33/137 (24%)
RICIN 507..629 CDD:238092 34/138 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.