DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and GALNT5

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_016858726.1 Gene:GALNT5 / 11227 HGNCID:4127 Length:956 Species:Homo sapiens


Alignment Length:636 Identity:226/636 - (35%)
Similarity:326/636 - (51%) Gaps:91/636 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KNAAEL-TEQLDPNGDPITPVFRA-------ANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRL 94
            :|.:|: :..|.|:..|::....|       |.|:.|.|||...:...:...           .|
Human   361 RNRSEMSSSSLAPHRVPLSQTNHALTGGLEPAKINITAKAPSTEYNQSHIKA-----------LL 414

  Fly    95 PEPKGERKDWHDYAAME---ADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISV 156
            ||..|.    |....::   :.|.....|:.|..|.:.:..||:.|:...|.| ||..:||.|.|
Human   415 PEDSGT----HQVLRIDVTLSPRDPKAPGQFGRPVVVPHGKEKEAERRWKEGN-FNVYLSDLIPV 474

  Fly   157 NRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSE 221
            :|::.|.|...|..:.....||..|||..|.:|.::|||||::|||||:||.|:|:|:||||.|.
Human   475 DRAIEDTRPAGCAEQLVHNNLPTTSVIMCFVDEVWSTLLRSVHSVINRSPPHLIKEILLVDDFST 539

  Fly   222 WDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLI 286
            .|.||..||.|:.| ||. |.|:|..||.|||.||:|||:.|.|.|:.|.|||:|.|..||.||:
Human   540 KDYLKDNLDKYMSQ-FPK-VRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLL 602

  Fly   287 EPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLY--KQLP--VLPEDALDKSMPYR 347
            |.:.::.|...||:::.|:.:|.||.:.: :..||.|.|.|.:  :.:|  |:.::.:.::...|
Human   603 ERVYLSRKKVACPVIEVINDKDMSYMTVD-NFQRGIFVWPMNFGWRTIPPDVIAKNRIKETDTIR 666

  Fly   348 SPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKP 412
            .|||.||||:|:..:|::||.||..||:||||..|||||:|||||.:..:|||||.||||.. .|
Human   667 CPVMAGGLFSIDKSYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRND-NP 730

  Fly   413 RGNPRGH-NFVAKNHKRVAEVWMDEYKQYVYKRDPKTYD-NLDAGDLTRQRGVRERLKCKSFHWF 475
            ...|:.. ..|.:|..||||||:||||:..|.......| .||.|:||:||.:|::||||||.|:
Human   731 YSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWY 795

  Fly   476 MTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGK--STEE-AVGMFSCADNRTHPQPNQ 537
            :..|.||  ::.|.|.    |:|::.|||        :||  |.|. .|.:..|..::...|.|.
Human   796 LENVFPD--LRAPIVR----ASGVLINVA--------LGKCISIENTTVILEDCDGSKELQQFNY 846

  Fly   538 FWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYY------------------ 584
            .|       ||:......|  :...|....|.:..|.::.....|.:                  
Human   847 TW-------LRLIKCGEWC--IAPIPDKGAVRLHPCDNRNKGLKWLHKSTSVFHPELLSNSACGS 902

  Fly   585 -----DRQTQRLVHGENNKR--CLEGFVENGIAKVVANSCENGNDRQRWEF 628
                 ..|...:|. |||::  ||||.....|.||.|  |:.....|:|:|
Human   903 FPALLSLQVNHIVF-ENNQQLLCLEGNFSQKILKVAA--CDPVKPYQKWKF 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 111/237 (47%)
pp-GalNAc-T 181..480 CDD:133004 145/304 (48%)
Ricin_B_lectin 496..626 CDD:279046 36/157 (23%)
RICIN 498..628 CDD:238092 36/157 (23%)
GALNT5XP_016858726.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.