DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt6.2

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_031753046.1 Gene:galnt6.2 / 100486937 XenbaseID:XB-GENE-1000674 Length:623 Species:Xenopus tropicalis


Alignment Length:679 Identity:202/679 - (29%)
Similarity:312/679 - (45%) Gaps:153/679 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKRYVKRLLRKVVLLLVVIVTV------------SLVTTLVVER-----RMKNAAELTEQLDPNG 51
            ::.|....|..|.::.|:.|.:            ..:..:||.:     .|:.|.:..:...|..
 Frog     5 RRNYGPLKLAMVGMVFVIFVFIMHKDIGNGAKDDPWIKNIVVRKDQMINMMRGAMKNLKDSIPKL 69

  Fly    52 DPITPV----------------FRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGE 100
            ..:.||                :..|.:.|..:  ||| ||.||    |.:|         .||.
 Frog    70 QIMAPVQEVRPVEEKKSCLPGYYTPAELKPFME--RPP-QDPNS----PGAD---------GKGF 118

  Fly   101 RKD-WHDYAAMEADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSV-PDL 163
            .|: |.:   .|.:.|..||.:|                      .||...|||||::|:: ||.
 Frog   119 IKNIWTE---EEVEEKEKGFDKH----------------------CFNAFASDRISLHRALGPDT 158

  Fly   164 RLEACKTRKY--LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLK 226
            |...|..:|:  ...||..|:|.:|.||.::||||::|||:..:|..|||:|:||||.||.:.||
 Frog   159 RPLECIEQKFKRCPSLPTTSIIIVFHNEAWSTLLRTVYSVLYTSPAILLKEIILVDDASEDEYLK 223

  Fly   227 QPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAI 291
            :.|||||:.  ..:|.|.|..||:|||.||:.||.:|.|:|:.|.|:|.|..:.||.||:..:|.
 Frog   224 EKLDDYVKA--LQIVKIARQKERKGLITARLLGASIATGEVLTFLDAHCECFHGWLEPLLSRVAE 286

  Fly   292 NPKISTCPMVDTISHEDFSY---FSGNKDGARGGFDWKMLY--KQLPVLPE-DALDKSMPYRSPV 350
            :......|.:..|::..|.:   ....|..:||.|||.:.:  :.:|...| ...|::.|.::|.
 Frog   287 DHTAVVSPDITAINYNTFEFGKPVQQGKMNSRGNFDWSLAFNWEAIPAADEKQRKDETYPIKTPT 351

  Fly   351 MMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGN 415
            ..||||:|:..:|..:|.||::::|||||..|:||::|.|||.|..:|||.|.|:|| ...|...
 Frog   352 FAGGLFSISKAYFEHIGSYDEEMEIWGGENVEMSFRVWQCGGKLEIIPCSVVGHVFR-TKSPHTF 415

  Fly   416 PRGHNFVAKNHKRVAEVWMDEYKQYVYKRD---PKTYDNLDAGDLTRQRGVRERLKCKSFHWFMT 477
            |:|...:.:|..|:||||||:||...|:|:   .|.......||::::..::..|:||:|.|::.
 Frog   416 PKGTQVILRNQVRLAEVWMDDYKVLYYRRNEQAAKIAKEKSFGDISKRLKLKADLQCKNFTWYLE 480

  Fly   478 EVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQPNQFWELS 542
            .:.|:.   |.|...|:| .|.|:|            :.|:.                       
 Frog   481 NIYPEM---FVPDRDPTY-YGAIKN------------EGTQN----------------------- 506

  Fly   543 IFRDLRMKGFDSVCLDVHEGPPNATVW--MWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLEGFV 605
                         |:||.|.....:..  |:.||..||||::.|... :.|.|....:.||....
 Frog   507 -------------CIDVGENNNYGSQLPIMYPCHGMGGNQYFEYSTH-KELRHNLKTQLCLCSKY 557

  Fly   606 ENGIAKVV------ANSCENGNDRQRWEF 628
            |.|..|:|      .|:...||  :.|||
 Frog   558 EPGPVKLVDCQYKGQNTTVPGN--EEWEF 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 96/241 (40%)
pp-GalNAc-T 181..480 CDD:133004 120/307 (39%)
Ricin_B_lectin 496..626 CDD:279046 27/137 (20%)
RICIN 498..628 CDD:238092 28/137 (20%)
galnt6.2XP_031753046.1 OppC_N 1..>27 CDD:403960 5/21 (24%)
pp-GalNAc-T 178..483 CDD:133004 120/307 (39%)
Ricin_B_lectin 496..620 CDD:395527 30/140 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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