DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and Galnt6

DIOPT Version :10

Sequence 1:NP_722910.2 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001165534.1 Gene:Galnt6 / 100361647 RGDID:2319726 Length:622 Species:Rattus norvegicus


Alignment Length:624 Identity:199/624 - (31%)
Similarity:307/624 - (49%) Gaps:130/624 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AIKKRYVKRLL-RKVVLLLVVIVTVSLVTTLVVERRMKNAAELTEQLDPNGDPITPVFRAANIHP 65
            |::|.::|.|. :|..:|.:::..|:.:..::.:.:::........:..|...:...:..|.:.|
  Rat    37 AMEKPWLKSLAGQKDHVLDLMLGAVNNIRDVMPKLQIRAPEPQQNPVSTNHSCLPGFYTPAELRP 101

  Fly    66 TRKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIEN 130
            ..:  ||| ||.||    |.:|. :.|       ::|:|   ..:|...|..|:.:|        
  Rat   102 FWE--RPP-QDPNS----PGADG-KAF-------QKKEW---TLLETQEKDEGYKKH-------- 140

  Fly   131 PDEKQLEKEHYEMNGFNGLISDRISVNRSV-PDLRLEACKTRKY--LAKLPNISVIFIFFNEHFN 192
                          .||...|||||:.||: ||.|...|..:|:  ...||..||:.:|.||.::
  Rat   141 --------------CFNAFASDRISLQRSLGPDTRPPECVDQKFRRCPPLPTTSVVIVFHNEAWS 191

  Fly   193 TLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARI 257
            ||||::|||::.:|..|||:|:||||.|..:.||:.|:.||||  ..:|.:||..||:|||.||:
  Rat   192 TLLRTVYSVLHTSPAILLKEIILVDDASTDEHLKEKLERYVQQ--LQIVRVVRQQERKGLITARL 254

  Fly   258 AGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDG---A 319
            .||.||..:|:.|.|:|.|..:.||.||:..||.:......|.:.||....|.:....:.|   :
  Rat   255 LGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTAVVSPDIVTIDLNTFQFSKPMRRGKAHS 319

  Fly   320 RGGFDWKMLYKQLPVLPED----ALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQ 380
            ||.|||.:.: ...:|||.    ..|::.|.:||...||||:|:..:|..:|.||:|::|||||.
  Rat   320 RGNFDWSLTF-GWEMLPEHEKQRRKDETYPIKSPTFAGGLFSISKAYFEHIGTYDNQMEIWGGEN 383

  Fly   381 YELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRD 445
            .|:||::|.|||.|..:|||.|.|:|| ...|...|:|.:.:|:|..|:||||||:||:..|:| 
  Rat   384 VEMSFRVWQCGGQLEIIPCSVVGHVFR-TKSPHTFPKGTSVIARNQVRLAEVWMDDYKKIFYRR- 446

  Fly   446 PKTYDNLDA---------GDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQ 501
                 ||.|         ||::.:..:||:|.|.:|.|::..|.|:..|  |.:.|.  .:|.|:
  Rat   447 -----NLQAAKMAKENNFGDVSERLRLREQLHCHNFSWYLHNVYPEMFV--PDLNPT--FSGAIK 502

  Fly   502 NVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQPNQFWELSIFRDLRMKGFDSVCLDVHE----G 562
            |:..                                                |.||||.|    |
  Rat   503 NLGT------------------------------------------------SQCLDVGENNRGG 519

  Fly   563 PPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCL 601
            .|   :.|:.||:.||||::.|..| :.|.|....:.||
  Rat   520 KP---LIMYVCHNLGGNQYFEYTSQ-RDLRHNIGKQLCL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_722910.2 pp-GalNAc-T 181..480 CDD:133004 128/314 (41%)
beta-trefoil_Ricin_Pgant9-like 493..629 CDD:467340 24/113 (21%)
Galnt6NP_001165534.1 pp-GalNAc-T 180..485 CDD:133004 128/314 (41%)
beta-trefoil_Ricin-like 495..622 CDD:483949 25/114 (22%)

Return to query results.
Submit another query.