DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt13

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_005168002.1 Gene:galnt13 / 100330695 ZFINID:ZDB-GENE-091204-444 Length:581 Species:Danio rerio


Alignment Length:546 Identity:211/546 - (38%)
Similarity:301/546 - (55%) Gaps:67/546 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 RKDWHDYAAMEA--DRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDL 163
            |||.....|:.|  .|.....||.|.||.|...::.:: ||.:::|.||.:.||.|::|||:||:
Zfish    37 RKDHSLLPALRAVMSRAHEAPGEMGKAVVIPKEEQDKM-KELFKINQFNLMASDMIALNRSLPDV 100

  Fly   164 RLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQP 228
            ||:.|||:.|...|||.|::.:|.||.::||||:::|.|||:|.:||.:|:||||.||.|.||:.
Zfish   101 RLDGCKTKTYPDDLPNTSIVIVFHNEAWSTLLRTVHSAINRSPRQLLYEILLVDDASERDFLKEK 165

  Fly   229 LDDYVQQ-HFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAIN 292
            |:|||.. ..|  |.|:|..:|.|||.||:.||....|||:.|.|:|.|....||.||:..|..:
Zfish   166 LEDYVATLEVP--VRILRMEQRTGLIRARLRGAAATRGQVITFLDAHCECTTGWLEPLMARIKED 228

  Fly   293 PKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL-----DKSMPYRSPVMM 352
            .:...||::|.||.|.|.|.:|: |...|||:||:.::..|| |:..:     |:::|.|:|.|.
Zfish   229 RRAVVCPIIDVISDETFEYMAGS-DMTYGGFNWKLNFRWYPV-PQREMDRRKGDRTLPVRTPTMA 291

  Fly   353 GGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPR 417
            ||||:|:..:|.::|.||..:||||||..|:||:||.|||.|..|.||.|.|:|| ...|...|.
Zfish   292 GGLFSIDRTYFEEIGTYDSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFR-KATPYSFPG 355

  Fly   418 G-HNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAP 481
            | ...:.||::|:|||||||:|.:.|...|... .:|.||::.::.:||.||||.|.|::..|.|
Zfish   356 GTGQVINKNNRRLAEVWMDEFKDFFYIISPGVV-RVDYGDVSSRKALRESLKCKPFSWYLENVYP 419

  Fly   482 DFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQ-PNQFWELSIFR 545
            |     ..:....|:.|.|:||... .|:||||:...|.||.|:|     |.. .||.:..:..:
Zfish   420 D-----SQIPRRYYSLGEIRNVETN-QCVDNMGRKENEKVGFFNC-----HGMGGNQVFSYTADK 473

  Fly   546 DLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLEGFVENGIA 610
            ::|.   |.:|||...  .|..|.|..||...|||.:.||                        |
Zfish   474 EIRT---DDLCLDASR--LNGPVVMLKCHHMKGNQMFEYD------------------------A 509

  Fly   611 KVVANSCENGNDRQRWEFGFVNHTML 636
            :.|.          :||:.|...|.|
Zfish   510 EYVG----------KWEYDFKKRTFL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 109/239 (46%)
pp-GalNAc-T 181..480 CDD:133004 134/305 (44%)
Ricin_B_lectin 496..626 CDD:279046 34/130 (26%)
RICIN 498..628 CDD:238092 35/130 (27%)
galnt13XP_005168002.1 Glyco_tranf_2_3 115..359 CDD:290369 112/248 (45%)
pp-GalNAc-T 118..418 CDD:133004 134/305 (44%)
RICIN 431..560 CDD:238092 39/140 (28%)
Ricin_B_lectin 431..558 CDD:279046 39/140 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587010
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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