DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq4 and coq4

DIOPT Version :10

Sequence 1:NP_648977.3 Gene:Coq4 / 261607 FlyBaseID:FBgn0052174 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_031746303.1 Gene:coq4 / 548979 XenbaseID:XB-GENE-5888837 Length:281 Species:Xenopus tropicalis


Alignment Length:263 Identity:123/263 - (46%)
Similarity:166/263 - (63%) Gaps:11/263 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RLQKPLA--LRRGLRLAQANSQAVATEAPEAEPLDAFERQ-----YLKERIEISPFQRLFLGAGS 64
            |:.:|.|  ::.|.|.   .|...|.|..|.|...|..||     ...:.|..:..|:|.|.|||
 Frog    15 RVLRPAAPGMQAGGRF---RSNYAAEEGIEEEIQFAAARQEDPSSLYSDHIPTNAVQKLLLSAGS 76

  Fly    65 SIAALLNPRRHDMIACLGETTGEDALWTILDTMQASEEGQRIMADKPRIHTSTIDFKYLETLPPD 129
            ::.||.:|.||||:|.||||||..||..:.|.|:...||.:|:.::|||..||:||:.|..:|..
 Frog    77 AVMALYDPYRHDMVAVLGETTGAVALRKLRDQMRRDPEGLQILQERPRIRMSTLDFQTLREMPDG 141

  Fly   130 TFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVE 194
            |||..|.:||..|.||||:||.|:|::|.:|||:..||||.|||:||:|.|||||||||.|||.|
 Frog   142 TFGREYARFLDVNHVTPDTRMPVKFVDDEELAYVAQRYREVHDLMHTLLGMPTNMLGEVVVKWFE 206

  Fly   195 ALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRTKPLMPVYWEKRWEQNIHELRSE 259
            |:.||||||..||.||.:||..| |...|...:|||:::|:..:.::..|:||||.|::..||.|
 Frog   207 AVQTGLPMCILGAAFGPLRLNNK-RMKKLGVLVPWAVQSGRNARCVLNFYYEKRWGQSVASLREE 270

  Fly   260 LGI 262
            :||
 Frog   271 IGI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq4NP_648977.3 Coq4 54..265 CDD:461522 109/209 (52%)
coq4XP_031746303.1 Coq4 66..277 CDD:461522 109/209 (52%)

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