DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl12 and adgre5b.3

DIOPT Version :9

Sequence 1:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:602 Identity:105/602 - (17%)
Similarity:187/602 - (31%) Gaps:253/602 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AKNSSAKIPHCKYDETINISHFKRLNDAYIYEHFEIPANLTGEFDYKELMDGSKVPTEFPNLRGC 81
            |.|:..|:.|..   ::.::..|.|||.: .|||      |.|    :|::              
Zfish   210 AGNTPEKLKHLM---SLLMNSCKSLNDPH-GEHF------TAE----KLLE-------------- 246

  Fly    82 ICKVRPCIRICCARKNILSNGECSDGVKNEIKLTMLDLTMQDILLTDPTLAE--LNMIPQYNSTE 144
                    .:|.:..::||.|..:||   |.....||.....:.|..|.|.:  ..|..|....|
Zfish   247 --------NLCNSTDDLLSEGNVADG---ETLSVFLDAVENSMRLIGPQLKDPVTKMETQNTYAE 300

  Fly   145 LLILREQFQPCDEIVSLKRDEYTILKDGSILLHTSAEILSNDQYCLYPEI----YSDF------- 198
            :.:.|.|..|...:.         |..||...:||.|.:....|..:..:    |.|.       
Zfish   301 VAVTRNQTPPSGSVT---------LSTGSAHFNTSWETVVGKSYPGFAFVALVSYKDMNSSSDLF 356

  Fly   199 ------------------------------PET-------IRIINRRCYRNVMPGIA-------- 218
                                          |:|       ..|......|....|:|        
Zfish   357 NSMAREKSDVKEKQITYKLNSKVVTAVVSNPDTKHLSKPVTLIFTHEEKRAESEGVAYSCVYWSE 421

  Fly   219 -------------------------------------------QLSVISVVGFILTLAVYL---- 236
                                                       :|.||:.||.:|:|...:    
Zfish   422 SERGWSGRGCELAWSNSTHTACSCSHLSSFAVLMALYPVEDTFELVVITRVGLVLSLICLILCIL 486

  Fly   237 ------SVEKLRNL----LGKCL-------ICSLFSMFMEYFIWTMDYFRLLQSICSAAGYMKYF 284
                  |::..||.    |..||       :|.:.|...             |..|:....:.:|
Zfish   487 TFRFCRSIQGTRNSIHLHLSVCLFIADLVFLCGISSTHN-------------QVACAIVAGLLHF 538

  Fly   285 FSMSSYLWFSVVSFHLWELFTSLNRHEPQYRFLIYNT-----FVWCTA-AIPTVVI----FSMNQ 339
            |.:|::.|..:....|:.:..           |:::|     :::... .:|.|::    .::.:
Zfish   539 FFLSAFCWMLLEGVQLYRMVV-----------LVFHTTLKHLYMYAVGYGVPLVIVSISAIAVPK 592

  Fly   340 MWENDPGKSEWLPLVGYFGCSVKDWNSSSWFYSHIPIVILNSFNVIMFVLTAIYIWKVKKGVKSF 404
            .:..|  :..||.|.||...|         |:  ||:.|:...|:.:|::|   :||:       
Zfish   593 GYGTD--RHCWLSLEGYLILS---------FF--IPVCIIVILNITVFIIT---VWKL------- 634

  Fly   405 AQHDERNTTCLEFNV----QTYIQFVRLFL--------IMGASWLLDQLTRLAEDSHLLLDTIVL 457
                     .|:|:.    .:.:..:|.||        ::|.||:..........:.     ::|
Zfish   635 ---------ALKFSSLNPDLSKLHKIRSFLATAVAQLCVLGGSWVFGFFLFQKNGTE-----VML 685

  Fly   458 NLTVYLNAAFGILIFVL 474
            .|.:.||:..|.|||::
Zfish   686 YLFIILNSLQGALIFIM 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl12NP_731791.2 Methuselah_N 27..209 CDD:284145 40/231 (17%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..105 CDD:214542
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639 0/43 (0%)
7tm_2 466..699 CDD:278432 55/293 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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