DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl12 and Adgre1

DIOPT Version :10

Sequence 1:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001007558.1 Gene:Adgre1 / 316137 RGDID:1359214 Length:932 Species:Rattus norvegicus


Alignment Length:285 Identity:57/285 - (20%)
Similarity:107/285 - (37%) Gaps:82/285 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 SVISVVGFILTLAVYLSVEKLRN-----LLGKCLICSLFSMFMEYFIWTMDYFRLLQSICSAAGY 280
            :|||:|...|.:|.:|....::|     .|..| :|...:..:  |:..:|......:....||:
  Rat   656 TVISLVCLALAIATFLLFRAVQNHNTYLHLHLC-VCLFLAKIL--FLTGIDKTDNQTACAIIAGF 717

  Fly   281 MKYFFSMSSYLWFSVVSFHLW---------ELFTSLNRHEPQYRFLIYNTFVWCTAAIPTVVI-- 334
            :.|.| ::.:.|..|.:..|:         ..|:|.|     .:.|....|.:   .:|.||:  
  Rat   718 LHYLF-LACFFWMLVEAVMLFLMVRNLKVVNYFSSRN-----IKMLHLCAFGY---GLPVVVVII 773

  Fly   335 --------FSM-NQMWENDPGKSEWLPLVGYFGCSVKDWNSSSWFYSHIPIVILNSFNVIMFVLT 390
                    :.| |:.|.|......|    .:.|                |:.::.:.|..:...|
  Rat   774 SATVHPWGYGMHNRCWLNTETGFIW----SFLG----------------PVCMIITINSALLAWT 818

  Fly   391 AIYIWKVKKGVKSFAQHDE----RNTTCLEFNVQTYIQFVRLFLIMGASWLLD--QLTRLAEDSH 449
               :|.:::  |..:.:.|    ::|..|.|..      :....|:|.||:|.  |:..||    
  Rat   819 ---LWVLRQ--KLCSVNSEVSKLKDTRLLTFKA------IAQIFILGCSWVLGIFQIGPLA---- 868

  Fly   450 LLLDTIVLNLTVYLNAAFGILIFVL 474
                :|:..|...:|:..|..||::
  Rat   869 ----SIMAYLFTTINSLQGAFIFLI 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl12NP_731791.2 Methuselah_N 27..209 CDD:429053
7tmB3_Methuselah-like 220..488 CDD:410632 57/285 (20%)
TM helix 2 246..268 CDD:410632 4/21 (19%)
TM helix 3 276..303 CDD:410632 7/35 (20%)
TM helix 4 316..336 CDD:410632 5/29 (17%)
TM helix 5 364..394 CDD:410632 3/29 (10%)
TM helix 6 410..444 CDD:410632 9/35 (26%)
TM helix 7 449..479 CDD:410632 6/26 (23%)
Adgre1NP_001007558.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..>109 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..255 CDD:214542
EGF_CA 272..>301 CDD:214542
EGF_CA 319..349 CDD:429571
Cell attachment site. /evidence=ECO:0000255 507..509
GPS 592..641 CDD:197639
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 596..643
7tmB2_EMR 645..907 CDD:320555 57/285 (20%)
TM helix 1 647..672 CDD:320555 6/15 (40%)
TM helix 2 681..703 CDD:320555 4/24 (17%)
TM helix 3 712..739 CDD:320555 7/27 (26%)
TM helix 4 756..776 CDD:320555 5/22 (23%)
TM helix 5 793..816 CDD:320555 4/42 (10%)
TM helix 6 840..865 CDD:320555 8/30 (27%)
TM helix 7 869..894 CDD:320555 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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