DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl12 and lat-2

DIOPT Version :10

Sequence 1:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001040724.1 Gene:lat-2 / 173771 WormBaseID:WBGene00002252 Length:1338 Species:Caenorhabditis elegans


Alignment Length:275 Identity:66/275 - (24%)
Similarity:120/275 - (43%) Gaps:44/275 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 GIAQ-LSVISVVG-----FILTLAV-----YLSVEKLRNLLGKCL-ICSLFSMFMEYFIWTMDYF 268
            |:|. |.|:|.:|     ..|.|:|     :.:::.:||.:.:.| :|.|.:..:  |:..||..
 Worm   892 GLASALDVVSTIGCAISIVCLALSVCVFTFFRNLQNVRNSIHRNLCLCLLIAELV--FVIGMDRT 954

  Fly   269 RLLQSICSAAGYMKYFFSMSSYLWFSVVSFHLWELFTSLNRHEP-QYRFLIYNTFVWCTAAIPTV 332
            . .::.|.....:.::|.:||:.|..:..:.|:.:...:  .|| :.|..:|..|.:.|.|:  |
 Worm   955 G-NRTGCGVVAILLHYFFLSSFCWMLLEGYQLYMMLIQV--FEPNRTRIFLYYLFCYGTPAV--V 1014

  Fly   333 VIFSMNQMWENDPGKSEWLPLVGYFGCSVKDWNSSSWFYSHIPIVILNSFNVIMFVLTAIYIWKV 397
            |..|....|| |.|...:        |.:.....:.|.:. .||:::.:.|:| |:|.|:   ||
 Worm  1015 VAISAGIKWE-DYGTDSY--------CWIDTSTPTIWAFV-APIIVIIAANII-FLLIAL---KV 1065

  Fly   398 KKGVKSFAQHDERNTTCLEFNVQTYIQFVRLFLIMGASWLLDQLTRLAEDSHLLLDTIVLNLTVY 462
            ...|:|      |:.|.....:........|..::|.:|:...||.:...:    .|....:...
 Worm  1066 VLSVQS------RDRTKWGRIIGWLKGSATLLCLLGITWIFGFLTAVKGGT----GTAFAWIFTI 1120

  Fly   463 LNAAFGILIFVLLIL 477
            ||...||.||||.::
 Worm  1121 LNCTQGIFIFVLHVV 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl12NP_731791.2 Methuselah_N 27..209 CDD:429053
7tmB3_Methuselah-like 220..488 CDD:410632 64/270 (24%)
TM helix 2 246..268 CDD:410632 6/22 (27%)
TM helix 3 276..303 CDD:410632 5/26 (19%)
TM helix 4 316..336 CDD:410632 6/19 (32%)
TM helix 5 364..394 CDD:410632 8/29 (28%)
TM helix 6 410..444 CDD:410632 7/33 (21%)
TM helix 7 449..479 CDD:410632 9/29 (31%)
lat-2NP_001040724.1 CLECT 52..193 CDD:214480
Gal_Rha_Lectin_LAT2 228..322 CDD:438697
HormR 479..542 CDD:214468
GAIN 556..>660 CDD:465137
GPS 837..884 CDD:197639
7tmB2_latrophilin-like_invertebrate 895..1149 CDD:320556 64/272 (24%)
TM helix 1 896..921 CDD:320556 7/24 (29%)
TM helix 2 930..952 CDD:320556 5/23 (22%)
TM helix 3 961..988 CDD:320556 5/26 (19%)
TM helix 4 1000..1020 CDD:320556 7/21 (33%)
TM helix 5 1037..1066 CDD:320556 9/33 (27%)
TM helix 6 1079..1106 CDD:320556 5/26 (19%)
TM helix 7 1112..1137 CDD:320556 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.

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