DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA12 and YDR061W

DIOPT Version :10

Sequence 1:XP_011509253.1 Gene:ABCA12 / 26154 HGNCID:14637 Length:2598 Species:Homo sapiens
Sequence 2:NP_010346.3 Gene:YDR061W / 851633 SGDID:S000002468 Length:539 Species:Saccharomyces cerevisiae


Alignment Length:392 Identity:80/392 - (20%)
Similarity:153/392 - (39%) Gaps:83/392 - (21%)


- Green bases have known domain annotations that are detailed below.


Human  2132 NDPTLELISETLKRIFLIFPQFCFGYGLIELSQQQSVLDFLKAYGVEYPNETFEMNKLGAMFVAL 2196
            :||.|.|....:..|    .||...|..||:|....::     .|:.|.:..    ......:..
Yeast   186 DDPFLGLDPAAIATI----SQFLAKYDSIEVSGGCPIV-----IGLRYQDTI----PAWCTHICC 237

Human  2197 VSQ--GTMFFSLRLLINESLIKKLRLFFRKFNSSHVRETIDEDEDVRAERLRVESGAAE-FDLVQ 2258
            |.:  |.:|        |..|:||:....:..|..::|         .|:|:..|.:.| ..:..
Yeast   238 VDEKNGILF--------EGPIEKLQSKMDETRSRALKE---------LEQLKKASNSKEDISIND 285

Human  2259 LYCL-----TKTYQLI--------------HKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFK 2304
            |.|:     .|.:::|              :|....:.|:...:..|..:.:.|.||:||:|:..
Yeast   286 LICIHPMYGKKEHEIIKMPHLIELDGLSVSYKGEAVLENLHWKVQPGSKWHIRGDNGSGKSTLLS 350

Human  2305 MLTGDIIPSSGNILIRN----KTGSLGHVDSHSSLVGYCPQEDAL------------DDLVT--- 2350
            :||.:...|..:.:|.|    :||...:.|.:|.:....|:..|:            :.:.|   
Yeast   351 LLTAEHPQSWNSRVIDNGVPRRTGKTNYFDLNSKIGMSSPELHAIFLKNAGGRLNIRESVATGYH 415

Human  2351 ---VEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPFKDRAT-SMCSYGTKRKLSTALALIGKP 2411
               ...:|..:.|:    :|:.:|.|:..|:...|....|... ...|...::.:....:||..|
Yeast   416 EASSNNYLPIWKRL----DKNSQEIVNMYLKYFGLDKDADSVLFEQLSVSDQKLVLFVRSLIKMP 476

Human  2412 SILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGKFQCIGSL 2476
            .||:|||..|||:.:......:.:.|.   ..:|::.:|..||.......|.::..|::: ||.:
Yeast   477 QILILDEAFSGMEVEPMMRCHEFLEEW---PGTVLVVAHVAEETPKCAHYLRLISPGEYE-IGDM 537

Human  2477 QH 2478
            ::
Yeast   538 EN 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA12XP_011509253.1 rim_protein 7..>86 CDD:130324
rim_protein 752..2579 CDD:130324 80/392 (20%)
YDR061WNP_010346.3 PRK10938 <145..531 CDD:182852 77/381 (20%)
Blue background indicates that the domain is not in the aligned region.

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