DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA12 and CG42816

DIOPT Version :10

Sequence 1:XP_011509253.1 Gene:ABCA12 / 26154 HGNCID:14637 Length:2598 Species:Homo sapiens
Sequence 2:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster


Alignment Length:434 Identity:92/434 - (21%)
Similarity:145/434 - (33%) Gaps:143/434 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   104 ADLDALSPIH--TPQRSVPEVDPAATMPRSQS-QQRTSAGSYSSPPPAPYSAPQAPALSVT---- 161
            |.:..||.||  ||:    ..|.|..:.|..: ....|.||.||...||.:..:.|.||.:    
  Fly    71 ASMVLLSNIHINTPK----STDRAKRIRRPIAFDYDGSGGSCSSSFLAPSTPERLPGLSRSVSFE 131

Human   162 ---GPITANSEQIARLRSEL--DVVRGNT----------KVMSEMLTEMVPGQE-DSSDLELLQE 210
               .|:...:...::..|:|  ...||.:          |:.|:.....:|..| |..||.  ..
  Fly   132 LPETPLRTGNRSASQPSSQLTPHKARGGSLKRKHSTFREKLYSDADGVALPADENDPRDLN--DS 194

Human   211 LNRTCRAMQ--QRIVELISRVSNEEVTEELLHVND----DLNNVFLR----------------YE 253
            |:..||.::  ..|:.:..|...:...|:|:..:.    .....||:                :.
  Fly   195 LDADCRRLEDISPILNVKRRKHQDRGIEDLMRSSTPKTASSQPTFLQVGAAAGRNPPLGAKRTFR 259

Human   254 RFERYRSGRSVQNASNGVLN-------EVTEDN------LIDLGPGSPAVVSPMVGNTAPPSSLS 305
            :|:.:...:...||:..:|.       |.|.:.      |.::.| .|||...::    ||..|:
  Fly   260 KFQSFSPSKMQPNATRPLLRQNAIRALEHTPEKRKEQRVLAEIHP-QPAVADAVL----PPLDLA 319

Human   306 SQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 370
            :.|....||..|     ..|:|                       |||         ...:||  
  Fly   320 ALLDAPILGEPS-----RQLEQ-----------------------TVT---------TVPSLD-- 345

Human   371 KQSSEGTFLSSAQKRGRGGESDLEPIDSWLI-TQGMIPVAQ-PSVMDDIEVWLRTDLKGDDLEEG 433
                               :..|.|..:.|| .:.|.|.|. |...||..|...::..       
  Fly   346 -------------------DFSLTPSKANLIDLELMAPAADGPFATDDYLVRHASNFS------- 384

Human   434 VTSEEFDKFLEE---RAKAAEMVPDLPSPPMEAPAPASNPSGRK 474
             .:...:..|||   :|.||.:...||.|  :.| |:...||||
  Fly   385 -YAPTLNSILEESPIKAAAAFLPGKLPLP--KTP-PSVTKSGRK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA12XP_011509253.1 rim_protein 7..>86 CDD:130324
rim_protein 752..2579 CDD:130324
CG42816NP_730301.3 rim_protein <81..1451 CDD:130324 87/424 (21%)
Blue background indicates that the domain is not in the aligned region.

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