DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA12 and CG8908

DIOPT Version :10

Sequence 1:XP_011509253.1 Gene:ABCA12 / 26154 HGNCID:14637 Length:2598 Species:Homo sapiens
Sequence 2:NP_611464.3 Gene:CG8908 / 37293 FlyBaseID:FBgn0034493 Length:1626 Species:Drosophila melanogaster


Alignment Length:431 Identity:90/431 - (20%)
Similarity:143/431 - (33%) Gaps:182/431 - (42%)


- Green bases have known domain annotations that are detailed below.


Human   159 SVTGPITANS----------EQIARLRS----ELDVV-----------RGNTKVMSEMLTEM--V 196
            |:..|.|.|:          |:||...:    |||.|           :.||.....::..|  :
  Fly   542 SIFAPATTNAGNLILYELDPEEIANTATDGPDELDPVHQLKAAFIYHIKRNTVAADGLIASMLEL 606

Human   197 PGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNE--------EVTEE-------LLHVNDDLN 246
            |||.:..|    .||:||       ::::...::.:        |||::       .:.:...|.
  Fly   607 PGQRELVD----GELDRT-------VLKIAIDLAQDTPAADPRWEVTDKHALGSSTSMQIIQQLR 660

Human   247 NVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGL 311
            ...:.|.:|..:...|.:.:.    ||.||.    ..|.|:.|      ||..|.|     |...
  Fly   661 EKNVAYTQFIEFLHSRKLWDR----LNAVTS----GAGAGTEA------GNARPTS-----LCLA 706

Human   312 DLGTESVSGTLS------------------SLQQCN---------PRDGFDMFAQTRGNSLAEQR 349
            |:| |.:..|:.                  .|:|.|         |:|.|  :|||  |.:.|..
  Fly   707 DIG-EKIVATIGIKCLHNSHSRIIDEAINLVLRQSNRTVPFPNLTPQDLF--YAQT--NRVEELF 766

Human   350 KTVTYEDPQAVGG----------LASAL--------------DNRKQSSEGTFL--SSAQKR--- 385
            |.::    :.|.|          :.|||              ...::|..|||.  ...|||   
  Fly   767 KVLS----ELVDGYVQQELTALQIQSALVEVNTIVLTVLQEVVKYRESKAGTFTVREELQKRYEQ 827

Human   386 -------GRGGESD-LEPIDSWLITQGMIPVAQPS---------------VMDDIEVWLRTDLKG 427
                   |:.|..| |..:.|..:..|:...|:|.               |:|..:.:|      
  Fly   828 IPWTAMPGKHGLRDVLLQLISCTLRHGVKGTAEPEFRMKHFKHLTELIDYVLDGRKTYL------ 886

Human   428 DDLEEGVTSEE-----FDKFLEERAKAAEMVPDLPSPPMEA 463
                |.|..||     ..::..:|:       ||..|.:||
  Fly   887 ----ESVHDEEKYAVLLQQYESQRS-------DLIYPLVEA 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA12XP_011509253.1 rim_protein 7..>86 CDD:130324
rim_protein 752..2579 CDD:130324
CG8908NP_611464.3 rim_protein <124..1626 CDD:130324 90/431 (21%)
Blue background indicates that the domain is not in the aligned region.

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