DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA12 and CG11147

DIOPT Version :10

Sequence 1:XP_011509253.1 Gene:ABCA12 / 26154 HGNCID:14637 Length:2598 Species:Homo sapiens
Sequence 2:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster


Alignment Length:214 Identity:73/214 - (34%)
Similarity:124/214 - (57%) Gaps:7/214 - (3%)


- Green bases have known domain annotations that are detailed below.


Human  2274 IAVNNISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRN-KTGSLGHVDSHSSLVG 2337
            |.:|.:::.:..|..:||||.:|.||||:...:.|....:.|.:::.. |.|..|. ....|.||
  Fly    21 IVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPGS-GVPGSRVG 84

Human  2338 YCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPFKDRATSMCSYGTKRKLS 2402
            :.|||.||.:.:||:|.::::.|::|:.::.|:|. .|||:.|..:|...:....||.|.:|:||
  Fly    85 FMPQEIALVEEMTVKETIFYFGRIYGLTDERIREK-FKLLKELLQLPPARQMIKQCSGGQQRRLS 148

Human  2403 TALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQN-KCSVILTSHSMEEC-EALCTRLAIM 2465
            .|.|:|..|.:|:||||:.|:||..:..:|..:.|..:| |.:||:|:|.:||. :|.|  :.:|
  Fly   149 FACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIEEAKQANC--IGLM 211

Human  2466 VNGKFQCIGSLQHIKSRFG 2484
            .||......:..:|..:||
  Fly   212 RNGVLLAEDTPTNIMIKFG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA12XP_011509253.1 rim_protein 7..>86 CDD:130324
rim_protein 752..2579 CDD:130324 73/214 (34%)
CG11147NP_608954.1 CcmA 4..245 CDD:440746 73/214 (34%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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