DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8176 and RGD2

DIOPT Version :9

Sequence 1:NP_001097723.1 Gene:CG8176 / 261329 FlyBaseID:FBgn0037702 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_428268.1 Gene:RGD2 / 850497 SGDID:S000001847 Length:714 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:91/439 - (20%)
Similarity:159/439 - (36%) Gaps:145/439 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VDFNDYFWGEK-NNGYDVLYHNMKFG---------LIASK---ELSEFLREKSNIEE--QNSKMM 52
            :.|.||||.|. .:|.|||:..:..|         |.||:   |:|.. |:...||.  .|.|.:
Yeast     2 LSFCDYFWSEDLVSGLDVLFDRLYHGCEQCDLFIQLFASRMQFEVSHG-RQLFGIEAGMDNLKAV 65

  Fly    53 SKLAHKAGTLNSTFAPVWTILRTSAEKLS---TLHLQMVQKLTELV-KDVAKYADELHKKHKSVK 113
            .:...:..|::..       ||...:::|   |.||.:...:..|| :..:|:..| |::.  ::
Yeast    66 QEDEDEGVTVSRA-------LRGILQEMSQEGTHHLTIASNIESLVLQPFSKWCIE-HRER--IQ 120

  Fly   114 EEESQTLECVQAIQTSTVAVQKLRDLYASKVQELEKLRKDNGSHKDAEKLESKLKKLQEEYKALL 178
            ..|...|..|...:.|...|.||...|.:|.::||:.::   :|.:.::|.:.:|.|:       
Yeast   121 YSEKTLLTNVNNFRKSKKYVGKLEKEYFNKCRQLEEFKR---THFNEDELANAMKSLK------- 175

  Fly   179 DKHNPIKNEFERRMTQTCKRFQEIEEVHLRQMKEFLSTYLEMLQNNHDMVGQVHSDFKRQFVDMS 243
                 |:|::|             |:|...:...|.           :.:..:..|:|..     
Yeast   176 -----IQNKYE-------------EDVAREKDHRFF-----------NRIAGIDFDYKTM----- 206

  Fly   244 VDKLLEQFVLNKYTGLEKPEMPELEYVALSSGSRLQQPQVSASASNSNSATSIQAALRAGNAATT 308
              |...|.:|.|        :|:.:|         :.|.:|.|.||:|:...|...|       .
Yeast   207 --KETLQLLLTK--------LPKTDY---------KLPLISYSLSNTNNGGEITKFL-------L 245

  Fly   309 ASGSAVSMDQR---GDALAAISLGSGSAASG------------------SIPFAEDPILGAMGSP 352
            ...|...:||.   |..|  ::||.....:|                  :..||..|:.|:    
Yeast   246 DHMSLKDIDQAETFGQDL--LNLGFLKYCNGVGNTFVNSKKFQYQWKNTAYMFANVPMPGS---- 304

  Fly   353 RPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAKQQPSAGAGN 401
                             .:||.| .|.:....:|...:||:...:..||
Yeast   305 -----------------EEPTTG-ESLISRFNNWDGSSAKEIIQSKIGN 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8176NP_001097723.1 F-BAR_FCHO 11..269 CDD:153332 56/276 (20%)
Apolipoprotein 52..214 CDD:279749 32/165 (19%)
AP_Syp1_like_MHD 928..1194 CDD:271171
RGD2NP_428268.1 FCH 6..96 CDD:214492 27/97 (28%)
DEP_fRgd2 205..289 CDD:239883 22/116 (19%)
RhoGAP_fRGD2 473..708 CDD:239864
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23065
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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