DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8176 and fcho2

DIOPT Version :10

Sequence 1:NP_001097723.1 Gene:CG8176 / 261329 FlyBaseID:FBgn0037702 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_001135543.1 Gene:fcho2 / 100216087 XenbaseID:XB-GENE-943410 Length:812 Species:Xenopus tropicalis


Alignment Length:1221 Identity:368/1221 - (30%)
Similarity:519/1221 - (42%) Gaps:446/1221 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FNDYFWGEKNNGYDVLYHNMKFGLIASKELSEFLREKSNIEEQNSKMMSKLAHKAG--TLNSTFA 67
            |.:.||||||:|:||||||||.|.|::||||||:||:|.|||..|:.|:|||..|.  |...||.
 Frog     6 FLENFWGEKNSGFDVLYHNMKHGQISTKELSEFIRERSTIEEVYSRSMNKLAKSASNYTQLGTFG 70

  Fly    68 PVWTILRTSAEKLSTLHLQMVQKLTELVKDVAKYADELHKKHKSVKEEESQTLECVQAIQTSTVA 132
            |||.:.:||.|||:..||::|:||.:|:|:|.||.:|..|.||..|||.|.|||.||.||:.|.|
 Frog    71 PVWDVFKTSTEKLAGCHLELVKKLQDLIKEVQKYGEEQLKSHKKTKEEVSGTLEAVQNIQSITQA 135

  Fly   133 VQKLRDLYASKVQELEKLRKDNGSHKDAEKLESKLKKLQEEYKALLDKHNPIKNEFERRMTQTCK 197
            :.|.:|||.:|..|.|||:|:..:.|:.||...|.||..|.||..::|:...|.:||::||:|.:
 Frog   136 LHKAKDLYNAKCLEQEKLKKEGAAAKEIEKAAIKTKKATESYKICVEKYAAAKLDFEQKMTETAQ 200

  Fly   198 RFQEIEEVHLRQMKEFLSTYLEMLQNNHDMVGQVHSDFKRQFVDMSVDKLLEQFVLNKYTGLEKP 262
            :||:|||.||.::||.:.:|...:...|..:||||.||.....:::||.||::|..:|.||.|:|
 Frog   201 KFQDIEEAHLMRVKEIIESYSHSVSEVHIQIGQVHEDFINNMANITVDSLLQKFAESKGTGKERP 265

  Fly   263 EMPELEYVALSSGSRLQQPQVSASASNSNSATSIQAALRAGNAATTASGSAVSMDQRGDALAAIS 327
            ...|.|                    ..|:|..::                              
 Frog   266 GPIEFE--------------------ECNTAVVVE------------------------------ 280

  Fly   328 LGSGSAASGSIPFAEDPILGAMGSPRPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAK 392
                                                   |::.          |..:::.|||. 
 Frog   281 ---------------------------------------GVKQ----------KKRKTFGLPTI- 295

  Fly   393 QQPSAGAGNFGMAGSGSTNNTTTTTTASNNSNNLNTNNTTATTTTTTGTNNLTTNITKNSPNSED 457
                                                                             
 Frog   296 ----------------------------------------------------------------- 295

  Fly   458 TSNQDQTQQQPAEALTPTASATAIAAASAPGKKQLNATTSEQQLSKSLNEQEHLQQTAAATAATT 522
                                                                             
 Frog   296 ----------------------------------------------------------------- 295

  Fly   523 AAATTATTTTSRRATSLLNIFTSNSQVSGILRSRRDKTKTKKAKKKKDNEAAENIQEERLTSLDR 587
                                                      .||:||.|:.||           
 Frog   296 ------------------------------------------IKKEKDTESVEN----------- 307

  Fly   588 GNNTLLDYDDHGRSMKTQNSSGSSAGGGLAALSVTSAQGSVDSAGASSMGGSGGAAVASGSLPNA 652
                                                       |.|.|:           :||  
 Frog   308 -------------------------------------------ADADSL-----------NLP-- 316

  Fly   653 GALTNSASITAPGAASGTGTGYEVDEEGFSIQPAKEIAWEEGQDKSGSFYSDSDTDSDNDKQERR 717
                                  .||:||:||:| :||   :...|...|||.||:|.|.| ..:|
 Frog   317 ----------------------AVDDEGYSIKP-EEI---QNYTKENHFYSSSDSDEDED-GPKR 354

  Fly   718 IHVSIKPLK--NGQAPMSASVDELRATVENISLSPTGVFSHHSQQLQAARGAPASRQQSPEISNA 780
            .||.|||::  ||.....||:|||:.::.||||||.                 .|||        
 Frog   355 FHVEIKPVQPNNGAHNTMASLDELKVSIGNISLSPA-----------------VSRQ-------- 394

  Fly   781 STPTASVHPYAPLQSPTLSNNNNANNTTNSRYADLGDIFSEL---------GDMSMSAPSSATLG 836
                      :|.|...:|::.:.|.|..:..|:  .:.|:|         ...|.|..||::..
 Frog   395 ----------SPAQMNRISSSEDMNRTRLAGQAE--KVSSDLLAWDPLYGSSHESSSISSSSSTV 447

  Fly   837 KPPGRQIPTPTSASTGGSIAIPRPPSRRSDMIAIGPAATG-------------TAPGRGRMSPAP 888
            .||.|  || |..|.|..:..|||.||        |..|.             :.|.....||.|
 Frog   448 SPPAR--PT-TPLSVGSIVPPPRPVSR--------PKLTAAKLCGINEVPRPFSPPLTSNTSPPP 501

  Fly   889 VTAMNRAESIGSLEFRTAIGGV-----GSSRGPSPLTIGISDTIPLAVAFHEIIHAYFRGSDESR 948
            ..::.||||..|:....:|...     |.||||||:|:|..||:|:|||..|.::|||||:|.::
 Frog   502 SASLPRAESSSSISSSASISAANTPTFGISRGPSPVTLGNQDTLPVAVALSESVNAYFRGADPTK 566

  Fly   949 CQVKVSGDMMLSFPAGIAGLLANNPNPAKLGFRIKHVQNLENLVPNGKLVQIDRQQSSSVSTMLE 1013
            |.||::|:|.:|||:||..:..:||:||.|.||:|:...||.::||.:|:..|..||.:......
 Frog   567 CIVKITGEMTVSFPSGIIKVFTSNPSPAVLCFRLKNTSRLEQILPNNQLLYSDPSQSDNNCKDFW 631

  Fly  1014 FNMGALTALLRRQAENNPTASYFNVDILKYQVRTKPGASSCPFQLVSYWKCESSYTALKVDYKYN 1078
            .||.|:||.|::.:|.||:|||:|||||||||.:. |..|.|..|.:||||.||.|.:::|||||
 Frog   632 MNMQAVTAYLKKSSEQNPSASYYNVDILKYQVLSN-GIQSTPLNLATYWKCTSSTTDVRLDYKYN 695

  Fly  1079 NHAMASASPLLNVTLSVPVNGSVRNVQSKPHSAWLGESNRLVWNFTDISQNSQDGGVGTLRARLE 1143
            ..:||..|.|.||.:.|||:|.|.::||.|.:.|..|..:.:|..:.||:.|::||.|:|||:.:
 Frog   696 PESMAMPSILSNVQVLVPVDGGVTSMQSLPSAIWNAEQMKALWKVSVISEKSENGGAGSLRAKFD 760

  Fly  1144 LNDGPSTPALLATQFNCEGTTLSGIEFELQGSGYRLSLVKRRFVSGKYVCE 1194
            |:||||.|:.||.||..:|.||||::.||.|:||||||||:||.:|||:.|
 Frog   761 LSDGPSNPSTLAVQFVSDGCTLSGVDIELVGTGYRLSLVKKRFGTGKYMAE 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8176NP_001097723.1 F-BAR_FCHO 11..269 CDD:153332 125/259 (48%)
PHA03307 731..>921 CDD:223039 58/216 (27%)
AP_Syp1_like_MHD 928..1194 CDD:271171 131/265 (49%)
fcho2NP_001135543.1 F-BAR_FCHO2 5..273 CDD:153357 129/286 (45%)
FCHo2_MHD 546..812 CDD:211378 132/267 (49%)

Return to query results.
Submit another query.