DRSC/TRiP Functional Genomics Resources

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Protein Alignment PYGO1 and pygo-1

DIOPT Version :10

Sequence 1:NP_056432.1 Gene:PYGO1 / 26108 HGNCID:30256 Length:419 Species:Homo sapiens
Sequence 2:NP_500719.1 Gene:pygo-1 / 177280 WormBaseID:WBGene00015330 Length:698 Species:Caenorhabditis elegans


Alignment Length:323 Identity:72/323 - (22%)
Similarity:90/323 - (27%) Gaps:135/323 - (41%)


- Green bases have known domain annotations that are detailed below.


Human    85 PSSNPYLGP-GYPGFGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLGM--GFNRPHAF 146
            ||...|.|| .|||        |||.:||  .:|:....|......|||.||.||  |.. |..:
 Worm   397 PSPGQYPGPMHYPG--------MPPMMPP--GAPFSAGASYPPMGGPFPPNPYGMHPGMT-PGGY 450

Human   147 NFGPHDNSSFGNPSYNN--------ALSQNVNMP-------------NQHFRQ------------ 178
            .........||:||:..        |..|...||             .|||.|            
 Worm   451 PMSAPGKMPFGSPSFPQSAPSPAAMAAMQQGRMPGPPMPPHMMTPQQQQHFMQMQQAQMAHFNAQ 515

Human   179 -----------NPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNH------------ 220
                       :||...|   |..||...:....|.|.|.:.:|   |:..:|            
 Worm   516 KAAAAAAAAGMSPAARAS---PMGASPSPHHPHPSQFPPNHPAN---PMYHHHIMMMRAMHAQGG 574

Human   221 --------------------SFIPPPNTFGQAKAP---------PPKQDFTQGATKNTNQNSSAH 256
                                ..:||....|.|..|         ||.....||..  ...:....
 Worm   575 QPGHPGMMPPGMMPPGMMPPGMMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMP--GMPHGPPQ 637

Human   257 PPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEAT---NNNP------ANGTQNKPRQP 310
            ||                   :|.|:....:|:.|.||.   ..||      ||..|..|..|
 Worm   638 PP-------------------QNPALMVAGNRAGSAEAAAAQMGNPHHPMMGANMWQLTPHYP 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PYGO1NP_056432.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
Nuclear localization signal. /evidence=ECO:0000255 35..41
PTZ00395 <145..>357 CDD:185594 48/260 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..338 39/209 (19%)
PHD_PYGO1 341..397 CDD:277105
Interaction with H3K4me2 341..388
Interaction with BCL9. /evidence=ECO:0000269|PubMed:18498752 373..391
pygo-1NP_500719.1 None
Blue background indicates that the domain is not in the aligned region.

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