DRSC/TRiP Functional Genomics Resources

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Protein Alignment GGA1 and CG3529

DIOPT Version :10

Sequence 1:NP_001350700.1 Gene:GGA1 / 26088 HGNCID:17842 Length:656 Species:Homo sapiens
Sequence 2:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster


Alignment Length:564 Identity:129/564 - (22%)
Similarity:221/564 - (39%) Gaps:103/564 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    13 RINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKI-QSPQEWEAIQALTVRRGEATI 76
            ||..||:......:||:....|:.:||..:....|.|.:..:: |:..:...:...|:       
  Fly    21 RIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTL------- 78

Human    77 RPPPCDDTKVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 141
                    .|||||:|:|||.||..|.:..|:|||:|::.||   :.....::.|:|.|:..|..
  Fly    79 --------TVLETCVKNCGKAFHVLVAQKDFINELVKLIGPK---NDPPAAMQEKVLSLIQIWAD 132

Human   142 GL---PEEVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPRPKNVIFEDEEKSKMLARLLKSSH 203
            ..   |:...:.:.|..||.:||  ..|....|...|:..|: ::|   .|...:::|....:..
  Fly   133 AFKNQPDLNGVTQMYMELKNKG
I--EFPANDLDAMAPIYTPQ-RSV---PEMPPQLVAAQQHTIS 191

Human   204 PEDLRAANKLIKEMVQEDQK-----RMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSE 263
            |:.:.||.............     ..|:.:|..:.:|.|:||:.:|:|| :|..:.|..:....
  Fly   192 PQHMAAAAAAAAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEM-LSVLKPGQESPDDY 255

Human   264 DLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAGS 328
            .|:.||...|:.|:..:..|....:| ||..||.|:.||.|..|      .:|.:....:.:.|.
  Fly   256 ALLNELTSTCKEMQSRIVDLIGRVQD-DELTAEFLRINDELNNV------FLRHQRYEKNRSQGQ 313

Human   329 IPGSTS------ALLDLSGLDLPPAG-TTYPAMPTRPGEQASPEQPSASVSLLD----------- 375
            ..|.||      |.:.|.|:....|| ||...:|..|...|....|.:...|:|           
  Fly   314 GAGVTSPSAVLGAAMGLPGVGAAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLP 378

Human   376 DELMSLGLSDPTP--------PSG----------------------PSLDGTGWNSFQSSDATEP 410
            ..|..:.|....|        |:.                      ||:|....:...::...:|
  Fly   379 QSLGQISLGGGAPIGVQRSARPADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKP 443

Human   411 PAPALAQAPSMESRPPAQTSLPASSGLDDLDL-LGKTL---LQQSLPPESQQVRWEKQQPTPRLT 471
            ..|..||..:.|  ||..:.....:.:|:::. ||.:.   :::....|..:...|:......|.
  Fly   444 NQPQQAQRSAGE--PPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEERAAAAENLP 506

Human   472 LRDLQNKSSSCSSPSSSATSLLHTVSPEPPRPPQQPVPTELSLA 515
            .....|.::|.::.|:.|.||..|        |::|...|..||
  Fly   507 TISASNSAASATTGSAGADSLRKT--------PKKPGAEEDLLA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GGA1NP_001350700.1 VHS_GGA1 9..164 CDD:340806 42/154 (27%)
GGA_N-GAT 186..224 CDD:465702 5/42 (12%)
GAT_GGA1_GGA2 227..315 CDD:410586 26/87 (30%)
Alpha_adaptinC2 534..648 CDD:197886
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 40/150 (27%)
GAT_TOM1_like 222..307 CDD:410581 27/92 (29%)
Blue background indicates that the domain is not in the aligned region.

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