DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or19b and Or49b

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523721.1 Gene:Or49b / 36413 FlyBaseID:FBgn0028963 Length:375 Species:Drosophila melanogaster


Alignment Length:383 Identity:72/383 - (18%)
Similarity:154/383 - (40%) Gaps:59/383 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FWG----RHYTAYSMVWNVTFHICIWVSFSVNLLQS------NS------LETFCESLCVTMPHT 80
            ||.    ::...|..:...:|||...:.:.::..:.      ||      :.|...:..:...|.
  Fly    17 FWALLYDKNLRRYVCIGLASFHIFTQIVYMMSTNEGLTGIIRNSYMLVLWINTVLRAYLLLADHD 81

  Fly    81 LYMLKLINVRRMRGEM--ISSHWLLRLLDK--RLGCADERQIIMAGIERAEFIFRTIFRGLACTV 141
            .|:..:..:.....::  ::..::..:||:  ::|     :::..|         .:|.|:..::
  Fly    82 RYLALIQKLTEAYYDLLNLNDSYISEILDQVNKVG-----KLMARG---------NLFFGMLTSM 132

  Fly   142 VLGIIYISASSEPTLMYPTWIPWNWKDSTSAY---------LATAMLHTTALMANATLVLNLSSY 197
            ..| :|..:|||..|.:.:.|| ...:..|.|         |.|.| .....:...:|::.|   
  Fly   133 GFG-LYPLSSSERVLPFGSKIP-GLNEYESPYYEMWYIFQMLITPM-GCCMYIPYTSLIVGL--- 191

  Fly   198 PGTYLILVSVHTKALALRVSKLG----YGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMT 258
                ::...|..|||..|:.::.    ||...|. .::..::..|...|.|:.....:....:|.
  Fly   192 ----IMFGIVRCKALQHRLRQVALKHPYGDRDPR-ELREEIIACIRYQQSIIEYMDHINELTTMM 251

  Fly   259 CFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLFLLVILTTETLLLCYTAELPCKEGESLLTAVY 323
            ...:..:.:...|.:.:.|:..:......:..:::.:||.....|..|..||. ::..::.||.|
  Fly   252 FLFELMAFSALLCALLFMLIIVSGTSQLIIVCMYINMILAQILALYWYANELR-EQNLAVATAAY 315

  Fly   324 SCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381
            ...|.:..|..|:.:|.|:.|.|.|..::.|.|.||:::.|..::...||..|:|..:
  Fly   316 ETEWFTFDVPLRKNILFMMMRAQRPAAILLGNIRPITLELFQNLLNTTYTFFTVLKRV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 61/329 (19%)
Or49bNP_523721.1 7tm_6 53..364 CDD:251636 62/336 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465766
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326193at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.