DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or43a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:430 Identity:89/430 - (20%)
Similarity:150/430 - (34%) Gaps:106/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDISKVDSTRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNS 65
            |.|..:......|..||...::...|       |..:..::.|..||         ::||:|...
  Fly     1 MTIEDIGLVGINVRMWRHLAVLYPTP-------GSSWRKFAFVLPVT---------AMNLMQFVY 49

  Fly    66 LETFCESLCVTMPHTLYMLKLINV----------RRMRGEMISSHWLLRLLDKRLGCADE--RQI 118
            |......|...:.:..:...:.|.          ||...|.:..  |..|....|...||  |.|
  Fly    50 LLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFLGQ--LATLFHSILDSTDEWGRGI 112

  Fly   119 IMAGIERAEFIFRTIFRGLACTVVLGIIYISAS--------------SEPTLMYPTWIPWNWKDS 169
                :.|||...|.          |.|:.:|||              .|....:...:|.....|
  Fly   113 ----LRRAEREARN----------LAILNLSASFLDIVGALVSPLFREERAHPFGLALPGVSMTS 163

  Fly   170 TSAY-------LATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPA 227
            :..|       |.|.:|.:...|...:|...|:.: |..::.:.||      |:.::|.......
  Fly   164 SPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLAIF-GKAMLQILVH------RLGQIGGEEQSEE 221

  Fly   228 VRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLF 292
            .|.|. |...|..|..::|....|.:.:             |.......::||::    ..::||
  Fly   222 ERFQR-LASCIAYHTQVMRYVWQLNKLV-------------ANIVAVEAIIFGSI----ICSLLF 268

  Fly   293 LLVILTTET------------LLLCYT----AELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLM 341
            .|.|:|:.|            |.:.:|    |...|.|...:..|||:..|......||:.||:.
  Fly   269 CLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIF 333

  Fly   342 LARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381
            |.:.|.||.:..|.:.|:::..|..::..:|:..|:|..:
  Fly   334 LMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 73/355 (21%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 72/348 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465767
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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