DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or42a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:404 Identity:92/404 - (22%)
Similarity:172/404 - (42%) Gaps:35/404 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKVDSTRALVNHWRIFRIMGIH-PPGKRTFWGRHYTAYSMVWNVTFHICI-------WVSFSVNL 60
            |.|.|..|.:...|...:||:. ||.|      .:.|| ::|:...:.|.       :::..::.
  Fly    17 SPVRSRDATLYLLRCVFLMGVRKPPAK------FFVAY-VLWSFALNFCSTFYQPIGFLTGYISH 74

  Fly    61 LQSNSLETFCESLCVTMPHTLYMLKLINVRRMRGEMISSHWLLRLLDKRLGCADERQIIMAGI-- 123
            |...|...|..||.|.........|::.|..:......::.||..:|:|:....||..|...:  
  Fly    75 LSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSL 139

  Fly   124 -ERAEFIFRTIFRGLACTVVLGIIYISASSEPTLMYPTWIPW-NWKDSTSAYLATAMLHTTALMA 186
             .|..|.|..::...|....|..|:|....     |..:.|: :|:.||......|.|...|:..
  Fly   140 SNRIFFFFMAVYMVYATNTFLSAIFIGRPP-----YQNYYPFLDWRSSTLHLALQAGLEYFAMAG 199

  Fly   187 NATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSL 251
            .....:.:..||..:::::..|....|.|:.:||........:....||..|.||::|||....|
  Fly   200 ACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVDCL 264

  Fly   252 ERSLSMTCFLQFFSTACA-QCTICYFLLFGNVG-IMRFMNMLFLLVILTTETLLLCYTAELPCKE 314
            ...:|.|.|:||...... ..|:...:||.|:| .:..::.:..:::.||...:||......|.:
  Fly   265 RPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYK 329

  Fly   315 GESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLN 379
               |..|::..||:.:...:::.|:..|.:.|.|:..::..:.|||:.|...:.|.::::.||:.
  Fly   330 ---LADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391

  Fly   380 E------IRKTSLE 387
            :      :.|:.:|
  Fly   392 QMNISEKLAKSEME 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 73/312 (23%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 73/312 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468665
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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