DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or35a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster


Alignment Length:443 Identity:91/443 - (20%)
Similarity:158/443 - (35%) Gaps:131/443 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IFRIMGIHPP-----GKRTFWGRHY-----TAYSMVW------------------NV-------- 46
            :||:..|..|     ||   |||:.     .|.|:|:                  |:        
  Fly    22 VFRLNHIFWPLDPSTGK---WGRYLDKVLAVAMSLVFMQHNDAELRYLRFEASNRNLDAFLTGMP 83

  Fly    47 TFHICIWVSF-SVN-LLQSNSLETFCESLCVTM-------PHTLYMLKLINVRRMRGEMISSHWL 102
            |:.|.:...| |:: ||....|:.|.|.....:       |...        |::.|:||    :
  Fly    84 TYLILVEAQFRSLHILLHFEKLQKFLEIFYANIYIDPRKEPEMF--------RKVDGKMI----I 136

  Fly   103 LRLLDKRLGCADERQIIMAGI----ERAEFIFRTIFRGLACTVVLGIIYISASSEPTLMYPTWIP 163
            .||:....|......:|....    :..:|::..||     ......:||..   |.|:...|: 
  Fly   137 NRLVSAMYGAVISLYLIAPVFSIINQSKDFLYSMIF-----PFDSDPLYIFV---PLLLTNVWV- 192

  Fly   164 WNWKDSTSAYLATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAV 228
                   ...:.|.|...|.|:....:.||     |:|::|    .:.|.|.:.|          
  Fly   193 -------GIVIDTMMFGETNLLCELIVHLN-----GSYMLL----KRDLQLAIEK---------- 231

  Fly   229 RMQAILVGYIHDH---QIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLF----GNVGIMR 286
                |||.....|   |:.:.:.|:|.:::::.   ||.....||.|:..|::|    |.:..:.
  Fly   232 ----ILVARDRPHMAKQLKVLITKTLRKNVALN---QFGQQLEAQYTVRVFIMFAFAAGLLCALS 289

  Fly   287 F-------MNMLFLLVI--LTTETLLLCYTAELPCKEGESLLTAVYSCNW---LSQSVN-FRRLL 338
            |       .|.::.:..  .|.|.|.|...........:||.|..|..:|   |..|.| ...|.
  Fly   290 FKAYTNPMANYIYAIWFGAKTVELLSLGQIGSDLAFTTDSLSTMYYLTHWEQILQYSTNPSENLR 354

  Fly   339 LLMLARCQIPM----ILVSGV-IVPISMKTFTVMIKGAYTMLTLLNEIRKTSL 386
            ||.|....|.|    ..|:|: ...:|::....:::.:::..|.|..:::..:
  Fly   355 LLKLINLAIEMNSKPFYVTGLKYFRVSLQAGLKILQASFSYFTFLTSMQRRQM 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 70/342 (20%)
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 77/372 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465880
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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