DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or30a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:417 Identity:80/417 - (19%)
Similarity:160/417 - (38%) Gaps:78/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDISKVD--------STRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYS--MVWNVTFHICIWVS 55
            |::..:|        ||..|:..|   ..:.:|.      | |.|.|.:  ::.|.|.::.|::|
  Fly     1 MELKSMDPVEMPIFGSTLKLMKFW---SYLFVHN------W-RRYVAMTPYIIINCTQYVDIYLS 55

  Fly    56 FSVNLLQSNSLETFCES--LCVTMPHTLYMLKLINVRRMRGEM---ISSHWLLRLLDKRLGCADE 115
                   :.||:....:  |.|...:|:....|:.|:|...|.   |...:.:.||.     :|:
  Fly    56 -------TESLDFIIRNVYLAVLFTNTVVRGVLLCVQRFSYERFINILKSFYIELLQ-----SDD 108

  Fly   116 R--QIIMAGIERAEFIFRTIFRGLACTVVLGII-YISASSEPTLMYPTWIPW--NWKDSTSAYLA 175
            .  .|::....|...:...|...:.|...:|.: |....||..|.|..::|.  .:|.::..|..
  Fly   109 PIINILVKETTRLSVLISRINLLMGCCTCIGFVTYPIFGSERVLPYGMYLPTIDEYKYASPYYEI 173

  Fly   176 TAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLG-------YGAPLPAVRMQAI 233
            ..::..........:.:..::...|:.:...:..:.|..::..|.       .|..:..::.|..
  Fly   174 FFVIQAIMAPMGCCMYIPYTNMVVTFTLFAILMCRVLQHKLRSLEKLKNEQVRGEIIWCIKYQLK 238

  Fly   234 LVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFG---------NVGIMRFMN 289
            |.|::..       ..:|...|.:..||.|.:..|.       |||.         .|.::.:|.
  Fly   239 LSGFVDS-------MNALNTHLHLVEFLCFGAMLCV-------LLFSLIIAQTIAQTVIVIAYMV 289

  Fly   290 MLFLLVILTTETLLLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSG 354
            |:|      ..:::|.|.|.....:...:..|.|..||:...|:.::.|..::.|.|.|:.::.|
  Fly   290 MIF------ANSVVLYYVANELYFQSFDIAIAAYESNWMDFDVDTQKTLKFLIMRSQKPLAILVG 348

  Fly   355 VIVPISMKTFTVMIKGAYTMLTLLNEI 381
            ...|:::|....::...|:..|||..:
  Fly   349 GTYPMNLKMLQSLLNAIYSFFTLLRRV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 61/332 (18%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 61/332 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465768
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326193at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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