DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or24a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:410 Identity:76/410 - (18%)
Similarity:150/410 - (36%) Gaps:87/410 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNSLETFCESLCVTMPHTLYMLK 85
            ::|.:|..|||...:.::.::. :.:|:.......:.::.:..| :.|..::||......|.::|
  Fly    26 LIGFYPEQKRTVLVKLWSFFNF-FILTYGCYAEAYYGIHYIPIN-IATALDALCPVASSILSLVK 88

  Fly    86 LINVRRMRGEMISSHWLLRLLDKRLGCADERQII--MAGIERAEFIFRT--IFRGLACTVVLGII 146
            ::.:...:.|       ||.|.:|:....|:|..  ..|.::..:...|  .|..|.|.......
  Fly    89 MVAIWWYQDE-------LRSLIERVRFLTEQQKSKRKLGYKKRFYTLATQLTFLLLCCGFCTSTS 146

  Fly   147 YISASSEPTLMYPT----WIPWNWKDSTSAYLATAMLHTTALMANATLVLNLSSYPGTYLILVSV 207
            |........::..|    ||                ..|...|....|:|.|..||.|| |||..
  Fly   147 YSVRHLIDNILRRTHGKDWI----------------YETPFKMMFPDLLLRLPLYPITY-ILVHW 194

  Fly   208 HTKALALRVSKLGYGAPLPAVRMQAILVGY------------------------------IHDHQ 242
            |           ||...:..|......:|:                              ..:.:
  Fly   195 H-----------GYITVVCFVGADGFFLGFCLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEAR 248

  Fly   243 IILRLFKSLERSLSMTCFLQFFSTACAQCTICYF----LLFGN--VGIMRFMNMLFLLVILTT-- 299
            |:..:.|.::|...:....:..|....:.|:.:|    |:.|.  |.|:.|..:..::.::.|  
  Fly   249 IVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLGIIVYVVYTCA 313

  Fly   300 ---ETLLLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISM 361
               |..|.|.......:...:|..:.:|.:|...||..:::.|||:||.|..:.:......| |:
  Fly   314 VGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKIPFFSP-SL 377

  Fly   362 KTFTVMIKGAYTMLTLLNEI 381
            :|.|.:::...:::.|...:
  Fly   378 ETLTSILRFTGSLIALAKSV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 68/355 (19%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 69/356 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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