DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19b and Or13a

DIOPT Version :9

Sequence 1:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:380 Identity:74/380 - (19%)
Similarity:145/380 - (38%) Gaps:48/380 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TAYSM-VWNVTFHICIWVSFSVNLLQSNSLETF--CESLCVTMPHTLYMLKLINVR---RMRGEM 96
            |||.: .|.|...:.|.:|:....|.:|..:..  .|:.|.|....|..::||::|   |...::
  Fly    42 TAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQL 106

  Fly    97 ISSH----WLLRLLDKRLGCADERQIIMAGIERAEFIFRTIFRGLACTV----VLGIIYI----- 148
            |.:.    |:..         ..:..:.|...|....|..:...|||.:    ||.::.|     
  Fly   107 IENFSYEIWIPN---------SSKNNVAAECRRRMVTFSIMTSLLACLIIMYCVLPLVEIFFGPA 162

  Fly   149 -SASSEPTLMYPTWIPWNWKDSTSAYLATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKAL 212
             .|.::| ..|....|::.:.|...|:.|.:..:.|.:...|.:....:..|.::.........|
  Fly   163 FDAQNKP-FPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLL 226

  Fly   213 ALRVSKL--GYGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICY 275
            ..|::.|  |..|.|........|...:..|..|:...|.||...:.........::...|.:.:
  Fly   227 HQRIAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGF 291

  Fly   276 FLLFG-NVGIMRFMNMLFLLVILTTETLLLCYTAELPCKEGESLLTA--VYSCNW---------- 327
            .::.| |:.|..::..:..:....::..:||...:...|  :|.|||  :|.|.|          
  Fly   292 QIVTGKNMFIGDYVKFIIYISSALSQLYVLCENGDALIK--QSTLTAQILYECQWEGSDRIEIQS 354

  Fly   328 -LSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381
             ...:...|..:..|:...|.|:.:.:.....:|:::||.::..:.:..|||..:
  Fly   355 FTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 62/341 (18%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 62/332 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465882
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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