Protein Alignment vas and HCA4

DIOPT Version :9

• Sequence 1: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Sequence 2: NP_012501.1
• Gene: HCA4 / 853419
• SGDID: S000003570
• Length: 770
• Species: Saccharomyces cerevisiae
• Alignment Length: 444
• Identity: 128/444 - (28%)
• Similarity: 206/444 - (46%)
• Gaps: 77/444 - (17%)

  Fly   179 RRNEDDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQP 243
            |:.||:      .:|:::.|.:.|.|                             |:|.:
Yeast    16 RQKEDE------YIENLKTKIDEYDP-----------------------------KITKA----- 40

  Fly   244 IQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLL 308
             :.|....:.|..:..:.:|.:...|.||..||||...|.|::|.|:||||||.|||:|::.||.
Yeast    41 -KFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLY 104

  Fly   309 EDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVI 373
            .:.. .|......:|:|||||||:||:....|....:....|:|.||...:.:.|.|:| .:::|
Yeast   105 REKW-TEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILI 167

  Fly   374 ATPGRLLDFVDRTF-ITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPE 437
            .||||:|..:|:.. :...:.:.:|||||||.|||||.:.:..|::  |:.|..|||:||||..:
Yeast   168 GTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVS--TLSPSRQTLLFSATQSQ 230

  Fly   438 EIQRMAGEFLKNYVFVAI-GIVGGACSDVKQTIYEVNKYAKRSK-----LIEI-LSEQADGTIVF 495
            .:..:|...|.:|..|.. .::.|:          |||.|...:     .||: |:::.|....|
Yeast   231 SVADLARLSLTDYKTVGTHDVMDGS----------VNKEASTPETLQQFYIEVPLADKLDILFSF 285

  Fly   496 VETKRGADFLASFLSEKEF-----------PTTS---IHGDRLQSQREQALRDFKNGSMKVLIAT 546
            :::......:....|.|:.           |..|   :||.:.|..|.:.|..|.......|.||
Yeast   286 IKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFAT 350

  Fly   547 SVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRA 600
            .|.:||:|...:..|:..|.|..:|.|:||:||..|.|..|::.....|::..|
Yeast   351 DVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIMLTPQEQEA 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vas	NP_001260458.1	DEADc	247..454	CDD:238167	77/207 (37%)
		DEXDc	260..467	CDD:214692	77/208 (37%)
		Helicase_C	475..584	CDD:278689	33/128 (26%)
HCA4	NP_012501.1	SrmB	18..536	CDD:223587	127/442 (29%)
		DEADc_DDX10	52..249	CDD:350699	76/200 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910