DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vas and DRS1

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_013093.1 Gene:DRS1 / 850652 SGDID:S000003931 Length:752 Species:Saccharomyces cerevisiae


Alignment Length:668 Identity:188/668 - (28%)
Similarity:293/668 - (43%) Gaps:141/668 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDDWDDEPIVDTRGARGGDWSDDE-----DTAKSFSGE------AEGDGVGGSGGEG------- 47
            :||..||.||:|:        ||||     .|.|...|:      :|||.:.....|.       
Yeast    17 ISDSEDDVPILDS--------SDDEKVEAKKTTKKRKGKNNKKKVSEGDNLDEDVHEDLDAGFKF 73

  Fly    48 --------GGYQGGN-----------------RDV-FGRIGGGRGGGAGGYRGGNRDGGGFHGGR 86
                    ..:||.|                 :|| ..:|...:||........::........:
Yeast    74 DLDADDTTSNFQGWNFLAEGESNKDDAEAFVKKDVDLDKIIRRKGGLVKMAHIDSKQEEETEKEK 138

  Fly    87 REGERDFRGGE---GGFRGGQGGSRGGQGGSRGGQGGFRGGEGGFRGRLYENEDGDERRGRLDRE 148
            .|.|.|....|   .||..|...:.|.:..|                   |.|:.:|.:...:.|
Yeast   139 VEKENDSDDEELAMDGFGMGAPMNNGDENQS-------------------EEEEEEEEKEEEEEE 184

  Fly   149 ERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIVEDVERKREFYIPPEPSNDAIE 213
            |.        ::||...|:|.:           :|:|:..:   :..|.|.:||.|....::|.:
Yeast   185 EE--------EQEEMTLEKGGK-----------DDEIDEED---DSEEAKADFYAPETEGDEAKK 227

  Fly   214 IFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPV 278
                                        |..::|.|..|...::..:...||..|:|||..:||:
Yeast   228 ----------------------------QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPI 264

  Fly   279 ISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA- 342
            ...|:|::|.|.|||||||||::||:.:||..|  .::...:|:::.||||||||:.:..::.| 
Yeast   265 ALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKP--AKIASTRVIVLLPTRELAIQVADVGKQIAR 327

  Fly   343 FESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITF--EDTRFVVLDEADRML 405
            |.|.:..|:..||.:.|.|.:.:.....:|||||||.:|.: |...:|  :....:|:|||||||
Yeast   328 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHI-RNSASFNVDSVEILVMDEADRML 391

  Fly   406 DMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIY 470
            :.||.:::..||.  .:....|.|:||||...:|:.:....||..|.:.|.....|.:.:.|...
Yeast   392 EEGFQDELNEIMG--LLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFV 454

  Fly   471 EVNK--YAKRSKLIEILSEQADGT-----IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQR 528
            .:.|  :.|.:.|..:: .:.|.|     :|||..|..|..|...:.........:||...|.||
Yeast   455 RIRKRDHLKPALLFNLI-RKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQR 518

  Fly   529 EQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFF 593
            ..::..|||..:.|||.|.:|||||||..|:.|||||||...:.|:||:|||.|.|..||:.:|.
Yeast   519 LDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 583

  Fly   594 -DPEKDRAIAADLVKILE 610
             :..:||:|....:|.:|
Yeast   584 GESSQDRSIVRAAIKSVE 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 78/209 (37%)
DEXDc 260..467 CDD:214692 77/209 (37%)
Helicase_C 475..584 CDD:278689 44/113 (39%)
DRS1NP_013093.1 SrmB 232..726 CDD:223587 135/376 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53695
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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