DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and AT5G63120

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_974985.1 Gene:AT5G63120 / 836432 AraportID:AT5G63120 Length:591 Species:Arabidopsis thaliana


Alignment Length:639 Identity:225/639 - (35%)
Similarity:316/639 - (49%) Gaps:142/639 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YQGGNRDVFGRIGGGRGGG---AGGYRGGNRDGGGFHGGRREGERDFRGGEGGFRGGQGGSRGGQ 111
            |.||        |||.|..   ||...|.||            ...|:...|||..|:||.|||.
plant    39 YTGG--------GGGYGPSPVMAGDNSGYNR------------YPSFQPPSGGFSVGRGGGRGGY 83

  Fly   112 G--GSRGGQGGFRGGEGGFRGRLYENEDGDERRGRLDREERGGERRGRLDREERGGERGERGDGG 174
            |  |.|.|.|.:.||.|                                    |||         
plant    84 GQYGDRNGGGNWGGGGG------------------------------------RGG--------- 103

  Fly   175 FARRRRNEDDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSK--YNNIP----- 232
                                 ..|||.        |::.:......:.:||.|  |...|     
plant   104 ---------------------SSKREL--------DSVSLPKQNFGNLVHFEKNFYVESPTVQAM 139

  Fly   233 -------------VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRD 284
                         :.|.|.|||:|::.|..|:..|.|::.:.|.|:..|||||....|:...|||
plant   140 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRD 204

  Fly   285 LMACAQTGSGKTAAFLLPILSKLLEDPHELELGR---PQVVIVSPTRELAIQIFNEARKFAFESY 346
            |:..|:||||||.|:|||.|..:...|   .||:   |.|:|::||||||:||..|:|||...|.
plant   205 LIGIAETGSGKTLAYLLPALVHVSAQP---RLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSG 266

  Fly   347 LKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSE 411
            ::...:|||.....|...:.||..:||||||||:|.::......:...::|||||||||||||..
plant   267 VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEP 331

  Fly   412 DMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKY 475
            .:|:|::.:  ||:.|||::|||:|.|::.:|.:||::.....||... .|...:.|.|..|...
plant   332 QIRKIVSQI--RPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTP 394

  Fly   476 AKRSKLIEILSEQADGT--IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNG 538
            .|.::|:.:|.:..||:  ::|||||||.|.:...|....:|..:||||:.||:|::.|.:||:|
plant   395 EKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSG 459

  Fly   539 SMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAA 603
            ...::.||.||:||||:|:||.|:|||.|:.::||:||||||||.|..|.|.:||..:..: .|.
plant   460 RSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAK-FAR 523

  Fly   604 DLVKILEGSGQTVPDFL----RTCGAGGDGGYSNQNF---GGVDVRGRGNYVGD 650
            :|||||:.:||.||..|    |:.|:|..|....:||   ||    |||...||
plant   524 ELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRNFRPRGG----GRGGGFGD 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 161/375 (43%)
AT5G63120NP_974985.1 DEAD-like_helicase_N 121..543 CDD:475120 175/427 (41%)

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