DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and AT4G33370

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_195063.1 Gene:AT4G33370 / 829474 AraportID:AT4G33370 Length:542 Species:Arabidopsis thaliana


Alignment Length:397 Identity:149/397 - (37%)
Similarity:225/397 - (56%) Gaps:11/397 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTA 297
            :.|.|.|:|.||::|........::..:...|...|||||...:||:.||||::..|.||||||.
plant    85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTL 149

  Fly   298 AFLLPILSKLLEDPHELELGR---PQVVIVSPTRELAIQIFNEARKFAF----ESY--LKIGIVY 353
            .|:||::...|::...:.:..   |..:::.|:||||.|.::...:|..    :.|  |:..:..
plant   150 VFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCI 214

  Fly   354 GGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMT 418
            ||...|.|.:.:.:|.|:|:||||||.|.:.:..::.:..|.:.||||||::|:||.:|:|.:..
plant   215 GGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFD 279

  Fly   419 HVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIE 483
            |  .:.:.|||:||||.|.:||..|...|...|.|.:|..|.|..||.|.:..|.:.||...|:|
plant   280 H--FKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 342

  Fly   484 ILSEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSV 548
            .|.:.....::|.|.|...|.:..:|..|.....:|||.:.|..|:.|:..||.|...||:||.|
plant   343 CLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDV 407

  Fly   549 ASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSG 613
            ||:|||..:|:||||||||.:|::||||||||||.|..|.||:|.:..:......||..:|:.:.
plant   408 ASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAK 472

  Fly   614 QTVPDFL 620
            |.:|..|
plant   473 QRIPPVL 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 141/378 (37%)
AT4G33370NP_195063.1 SrmB 96..478 CDD:440279 143/383 (37%)

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