DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and AT3G58510

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_567067.1 Gene:AT3G58510 / 825020 AraportID:AT3G58510 Length:612 Species:Arabidopsis thaliana


Alignment Length:667 Identity:254/667 - (38%)
Similarity:352/667 - (52%) Gaps:142/667 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WSDDEDTAKSFSGE---------------------AEGDGVGGSGGEGGGYQGGNRDVFGRIGGG 64
            |:|..|:.|:.|..                     .:.|..|     .||...|:|......|||
plant     5 WADVADSEKAVSQSKPPYVPPHLRNRPSEPVAAPLPQNDHAG-----YGGQPAGSRWAPPSSGGG 64

  Fly    65 RGGGAGGYRG-GNRDGGGFHGGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQGGFRGGEGGF 128
             |...||||. |.|.|.|:                           |.||..||.||:....||:
plant    65 -GASGGGYRNDGGRTGYGY---------------------------GAGGGGGGGGGWNNRSGGW 101

  Fly   129 RGRLYENEDGDERRGRLDREERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIVE 193
                                          ||.||  |....||                     
plant   102 ------------------------------DRRER--EVNPFGD--------------------- 113

  Fly   194 DVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIID 258
            |.|.        ||      :|:....:||:|..|.:|||:.:|.|||.|:..|...||.|.:..
plant   114 DAEL--------EP------VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNL 164

  Fly   259 NVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGR----- 318
            |:.:..|..|||:|:.:||::.:.|||||||||||||||||..||:|.:::|.| :|..|     
plant   165 NIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQH-VERPRGSRAV 228

  Fly   319 -PQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDF 382
             |..||:|||||||.||.:||:||::::.:|:.:.||||....|...:.|||.:::||||||.|.
plant   229 YPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDL 293

  Fly   383 VDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPE--HQTLMFSATFPEEIQRMAGE 445
            ::|..::.:..||:.||||||||||||...:|:|:..:.|.|.  .||::||||||.:|||:|.:
plant   294 LERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAAD 358

  Fly   446 FLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSEQADG------TIVFVETKRGADF 504
            |:.||:|:|:|.||.:...:.|.:..|.:..|||.|:::|..|.:.      |:||||||||||.
plant   359 FMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADT 423

  Fly   505 LASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSK 569
            |.::|...|||.|||||||.|.:||.|||.||.|...:|:||.||:|||||.::.||:|:|:|:.
plant   424 LENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPND 488

  Fly   570 IDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRTCGA----GGDGG 630
            |||||||||||||.|.:|.||:||: |.:..:|..|.::::.:.|.||::|....:    ||...
plant   489 IDDYVHRIGRTGRAGKSGIATAFFN-ENNAQLARSLAELMQEANQEVPEWLTRYASRASFGGGKK 552

  Fly   631 YSNQNFGGVDVRGRGNY 647
            .|...|||.|.|..|:|
plant   553 RSGGRFGGRDFRREGSY 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 185/383 (48%)
AT3G58510NP_567067.1 SrmB 152..536 CDD:440279 186/385 (48%)

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