DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and Eif4a3l1

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001136206.1 Gene:Eif4a3l1 / 668137 MGIID:3644226 Length:411 Species:Mus musculus


Alignment Length:370 Identity:123/370 - (33%)
Similarity:203/370 - (54%) Gaps:27/370 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311
            |.:..||:.::..:...|::.|:.||:.:|..|..|||::|.:|:|:||||.|.:.:|..|    
Mouse    40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCL---- 100

  Fly   312 HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKI--GIVYGGTSFRHQNECITRGCHVVIA 374
             ::::...|.:|::||||||:||  :....|...|:.:  ....|||:.......:..|.|||..
Mouse   101 -DIQVRETQALILAPTRELAVQI--QKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAG 162

  Fly   375 TPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEI 439
            ||||:.|.:.|..:|....:.:||||||.||:.||.|.:..:..:  :.|..|.::.|||.|.||
Mouse   163 TPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRY--LPPATQVVLVSATLPHEI 225

  Fly   440 QRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVN----KYAKRSKLIEILS-EQADGTIVFVETK 499
            ..|..:|:.:.:.:.:.........:||....|.    |:.....|.:.|: .||   ::|..||
Mouse   226 LEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA---VIFCITK 287

  Fly   500 RGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINY 564
            |..|:|...:.|..|..:|:|||..|.:||..:::|::|:.:|||:|.|.:||||:..:..:|||
Mouse   288 RKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINY 352

  Fly   565 DMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKIL 609
            |:|:..:.|:|||||:||.|..|.|.:|        :..|.::||
Mouse   353 DLPNNRELYIHRIGRSGRYGRKGVAINF--------VKNDDIRIL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 69/208 (33%)
DEXDc 260..467 CDD:214692 66/208 (32%)
Helicase_C 475..584 CDD:278689 43/109 (39%)
Eif4a3l1NP_001136206.1 PTZ00424 22..411 CDD:185609 123/370 (33%)
DEADc 40..240 CDD:238167 69/208 (33%)
HELICc 251..380 CDD:238034 50/131 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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