DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and DDX55

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_016875199.1 Gene:DDX55 / 57696 HGNCID:20085 Length:618 Species:Homo sapiens


Alignment Length:404 Identity:121/404 - (29%)
Similarity:195/404 - (48%) Gaps:59/404 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 VPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPIL 304
            :|.|:.......||::        |:...||:|..:||:....:|:.|.|.||||||.||::|||
Human    12 LPVPLHPQVLGALREL--------GFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL 68

  Fly   305 SKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA--FESYLKIGIVYGGTSFRHQNECITR 367
            ..||....:|:..:...:|::|||||||||......|.  |..:.:| :..||   |:..|.:.|
Human    69 EILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQI-LWIGG---RNPGEDVER 129

  Fly   368 ----GCHVVIATPGRLLDFVDR--------TFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHV 420
                |.::::||||||.|...|        :.:...|.  :|||||||:|||||...:..|:.. 
Human   130 FKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDV--LVLDEADRLLDMGFEASINTILEF- 191

  Fly   421 TMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKY-------AKR 478
             :..:.:|.:||||..:|::.:....|:|.|.|::...|.|.|..::|...:..|       .|.
Human   192 -LPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKF 255

  Fly   479 SKLIEIL-SEQADGTIVFVETKRG------------------ADFLASFLS--EKEFPTTSIHGD 522
            ::|:..| :.:.:..:||.....|                  .::....|.  .|......||| 
Human   256 NQLVHFLRNHKQEKHLVFFRYSSGLCGRGIRDSARMCSTCACVEYYGKALEVLVKGVKIMCIHG- 319

  Fly   523 RLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNG 587
            :::.:|.:...:|:.....:|:.|.|.:||:||..:..|:.||.||....:|||.|||.|:|:.|
Human   320 KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGG 384

  Fly   588 RATSFFDPEKDRAI 601
            .|..|..|.::..|
Human   385 SALVFLLPMEESYI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 75/220 (34%)
DEXDc 260..467 CDD:214692 77/220 (35%)
Helicase_C 475..584 CDD:278689 33/136 (24%)
DDX55XP_016875199.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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