DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vas and DDX27

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001335116.2 Gene:DDX27 / 55661 HGNCID:15837 Length:796 Species:Homo sapiens


Alignment Length:527 Identity:157/527 - (29%)
Similarity:250/527 - (47%) Gaps:97/527 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ENEDGDERRGRLDRE---ERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINN-NNNI--- 191
            :.||.:.:.|:|::|   :.|.|.:.:.|.:|...|..|        ...:|.|.:: :.||   
Human    98 KTEDKEAKSGKLEKEKEAKEGSEPKEQEDLQENDEEGSE--------DEASETDYSSADENILTK 154

  Fly   192 -----VEDVERKREFYIPPEPSNDAIEIFSSGIASGIHF---SKYN-NIPVKVTGSDVPQPIQHF 247
                 |:|.::|::                .|..:|..|   |:|: |:              .|
Human   155 ADTLKVKDRKKKKK----------------KGQEAGGFFEDASQYDENL--------------SF 189

  Fly   248 TSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPH 312
            ...:|...::..:...|:|.||||||..|||...|:|:.|||.||:||||||.||:|.:|:..|.
Human   190 QDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPR 254

  Fly   313 ELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPG 377
            :..:.|  |:::.|||||.||:.:..|:.|....:...:..||...:.|...:.....::|||||
Human   255 QAPVTR--VLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPG 317

  Fly   378 RLLDFVDR-TFITFEDTRFVVLDEAD-------------------------------RMLDMGFS 410
            ||:|.:.. ..........::|||||                               ||||..|.
Human   318 RLIDHLHNCPSFHLSSIEVLILDEADSPPVDTAWPHAPTLWLLHLPFPQPGAISCPFRMLDEYFE 382

  Fly   411 EDMRRIMTHVTMRPEH-QTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEV-- 472
            |.|:.|   :.|...| ||::||||..:|::.:|...|||.|.:.:.........::|....:  
Human   383 EQMKEI---IRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRP 444

  Fly   473 NKYAKRSKLIEILSEQ--ADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDF 535
            |:...|..::..|..:  .|..::|.:||:.|..:...|.........:||:..|:||.:|||.|
Human   445 NREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRF 509

  Fly   536 KNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRA 600
            |:..:.:|:||.||:|||||:.:|.|||:.||:.|..||||:|||.|.|..||:.|... |.:|.
Human   510 KDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVG-EDERK 573

  Fly   601 IAADLVK 607
            :..::||
Human   574 MLKEIVK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 80/239 (33%)
DEXDc 260..467 CDD:214692 78/239 (33%)
Helicase_C 475..584 CDD:278689 43/110 (39%)
DDX27NP_001335116.2 SrmB 188..674 CDD:223587 133/399 (33%)
DEADc_DDX27 198..424 CDD:350705 78/230 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53695
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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