DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and CG7483

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster


Alignment Length:379 Identity:126/379 - (33%)
Similarity:204/379 - (53%) Gaps:24/379 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 TGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFL 300
            |..|| :.|..|.:.:|::.::..:...|::.|:.||:.||..|..|||::|.||:|:||||.|.
  Fly    18 TSEDV-EVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFS 81

  Fly   301 LPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECI 365
            :.||..|     :..|...||:.:|||||||:||............::..:..|||:.......:
  Fly    82 ISILQSL-----DTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKL 141

  Fly   366 TRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLM 430
            ..|.|:|..||||:.|.:.|..:.....:.:||||||.||:.||.|.:..:..:  :.|..|.::
  Fly   142 DYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRY--LPPATQVVL 204

  Fly   431 FSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVN----KYAKRSKLIEILS-EQAD 490
            .|||.|.||..|..:|:.:.:.:.:.........:||....|.    |:.....|.:.|: .|| 
  Fly   205 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA- 268

  Fly   491 GTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDI 555
              ::|..|||..|:|...:.|..|..:|:|||..|.:|::.:::|:.|..:|||.|.|.:||:|:
  Fly   269 --VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDV 331

  Fly   556 KNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKIL 609
            :.:..|||||:|:..:.|:|||||:||.|..|.|.:|        :.:|.::||
  Fly   332 QQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF--------VKSDDIRIL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 69/206 (33%)
DEXDc 260..467 CDD:214692 67/206 (33%)
Helicase_C 475..584 CDD:278689 42/109 (39%)
CG7483NP_649788.2 PTZ00424 4..399 CDD:185609 126/379 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451613
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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