DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and CG10077

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster


Alignment Length:623 Identity:225/623 - (36%)
Similarity:320/623 - (51%) Gaps:78/623 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GNRDVFGRIGGGRGGGAGGYRGG---NRDGGGFHGGRREGERDFRGGEG----GFRGGQGGSRGG 110
            |..:.|   |||.||||||..||   ||.|||..||...|...|:....    || .|.|.:.||
  Fly     6 GQMNAF---GGGGGGGAGGLAGGMVPNRMGGGAPGGGPGGAGMFQRNRSAPYPGF-NGHGPANGG 66

  Fly   111 QGGSRGGQGGFRGGEGGFRGRLYENEDGDERRGRLDREERGGERRGRLDREERGGERGERGDGGF 175
            |....|  ||...|.||.|     |:||           .||         :.||:|........
  Fly    67 QRRMNG--GGPSMGPGGPR-----NQDG-----------FGG---------QNGGQRSSNHGAHL 104

  Fly   176 ARRRRNEDDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDV 240
            .:...:|         |.....::.||.|.:      .:.:..:.....|...|.|.:|  |..|
  Fly   105 PKIVWSE---------VNLTPFRKNFYKPCD------SVLARTVGETETFLTSNEITIK--GDQV 152

  Fly   241 PQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILS 305
            |.|...|......|.:::.:.|.|:..||.||....|:..|||||:..||||||||.|::||.:.
  Fly   153 PTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVV 217

  Fly   306 KLLEDPHELELG-RPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGC 369
            .:...| .||.| .|..::::||||||.||...|.:|...::::...::||.....|...:.||.
  Fly   218 HINNQP-RLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGV 281

  Fly   370 HVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSAT 434
            .:||||||||:||::|...:.:...::|||||||||||||...:|:||..:  ||:.|.||:|||
  Fly   282 EIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI--RPDRQVLMWSAT 344

  Fly   435 FPEEIQRMAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKYAKRSKLIEIL----SEQADGTIV 494
            :|:|::::|.|||.||:.|.||.:. .|..::.|.:...::..|..|||::|    :|....||:
  Fly   345 WPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTII 409

  Fly   495 FVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIK 559
            |||||:..|.:...:|.:.:...:||||:.|.:|:..|..|:||...:|:||.||:||||:.::|
  Fly   410 FVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVK 474

  Fly   560 HVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTV-PDFLRTC 623
            .|||||.||..:|||||||||||..|.|.|.:.| ...:...|.||:::|..:.||: |..:...
  Fly   475 FVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLF-THSNANKANDLIQVLREANQTINPKLMNMA 538

  Fly   624 --------GAGGDGGYSNQNFGGVDVRGRGNYVGDATN 653
                    |.|..|||.    ||...:||...:|...|
  Fly   539 MNGGYNKRGGGMGGGYR----GGNGYQGRNPQMGGGYN 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 156/376 (41%)
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 192/543 (35%)

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