DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and Dbp45A

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster


Alignment Length:380 Identity:127/380 - (33%)
Similarity:197/380 - (51%) Gaps:46/380 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311
            |....||..::..:.|.|.|..||||:..||.|.:|:|.:..|:||||||.||.||||.:|.|:|
  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73

  Fly   312 --HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIA 374
              |       ..::::||.|||.||..:.........:::.:|.|||....:::.:.:..|:|:|
  Fly    74 VSH-------FALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVA 131

  Fly   375 TPGRLLDFVD--RTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPE 437
            .||||.|.:.  .|| :|::.:::|:|||||||:..|.|.:..|  ...:....|.|.||||.. 
  Fly   132 MPGRLADHLTGCDTF-SFDNLKYLVVDEADRMLNGDFDESLSII--ERCLPKTRQNLFFSATMK- 192

  Fly   438 EIQRMAGEFLKNYVFVAIGIVGGAC------SDVKQTIYEVNK-------YAKRSKLIEIL---- 485
                   :|:|.   .:|..:...|      ||| .|:..:::       |.:...|||.|    
  Fly   193 -------DFIKE---SSIFPIASDCFEWSQDSDV-ATVETLDQRYLLCADYDRDMVLIEALRKYR 246

  Fly   486 --SEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSV 548
              :|.|: .::|..||:....|:..|...|.....:||...|.:|..||..||:..::.||||.|
  Fly   247 EENENAN-VMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDV 310

  Fly   549 ASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAA 603
            |:|||||.:::.|:|:.:|....:|:||:|||.|.|..|.:.|.|...:|..:.|
  Fly   311 AARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 127/380 (33%)
Dbp45ANP_476927.1 SrmB 9..381 CDD:440279 127/380 (33%)

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