DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vas and me31B

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster


Alignment Length:497 Identity:128/497 - (25%)
Similarity:232/497 - (46%) Gaps:85/497 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 DDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHF 247
            :|:....|..:|:..|.:..:||:.                  :::....|..|..:      .|
  Fly    20 NDLQIAGNTSDDMGWKSKLKLPPKD------------------NRFKTTDVTDTRGN------EF 60

  Fly   248 TSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPH 312
            ....|:..::..:.:.|::.|:|||:.:||:..||:|::|.|:.|:|||.|:.:|:|.::  ||.
  Fly    61 EEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQI--DPT 123

  Fly   313 ELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPG 377
            :..:   |.:::.||||||:|......:.|....:::.:..|||..:.....|.:...::|||||
  Fly   124 KDYI---QALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPG 185

  Fly   378 RLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMR--PEHQTLMFSATFPEEIQ 440
            |:||.:|:........|.:||||||::|.:    |.:.::.||.::  .:.|.|:||||||..::
  Fly   186 RILDLMDKKVADMSHCRILVLDEADKLLSL----DFQGMLDHVILKLPKDPQILLFSATFPLTVK 246

  Fly   441 RMAGEFLKN------------------YVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSE 487
            ....:.|:.                  |.||          ..:|.::.:|...  |||      
  Fly   247 NFMEKHLREPYEINLMEELTLKGVTQYYAFV----------QERQKVHCLNTLF--SKL------ 293

  Fly   488 QADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRG 552
            |.:.:|:|..:.:..:.||..::|..:....||....|:.|.:...||:.|..:.|:.:.:.:||
  Fly   294 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRG 358

  Fly   553 LDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSG---- 613
            :|::.:..|||:|.|...:.|:|||||:||.|:.|.|.:....| ||   .||.:|.:..|    
  Fly   359 IDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYE-DR---FDLHRIEKELGTEIK 419

  Fly   614 ---QTVPDFLRTCGAGGDGGYSNQNFGGVDVRGRGNYVGDAT 652
               :.:...|.....|...|.:..|   .|:....|..|:.:
  Fly   420 PIPKVIDPALYVANVGASVGDTCNN---SDLNNSANEEGNVS 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 67/226 (30%)
DEXDc 260..467 CDD:214692 66/226 (29%)
Helicase_C 475..584 CDD:278689 33/108 (31%)
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 113/392 (29%)
DEADc 60..260 CDD:238167 65/208 (31%)
HELICc 270..398 CDD:238034 41/145 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451573
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.