DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and Hel25E

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster


Alignment Length:432 Identity:123/432 - (28%)
Similarity:210/432 - (48%) Gaps:58/432 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 EDDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQH 246
            ||:.......||:.|         .|..|.     .|....||.|.:.:..:|      |:.:: 
  Fly    11 EDEEQTETTAVENQE---------APKKDV-----KGTYVSIHSSGFRDFLLK------PEILR- 54

  Fly   247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311
                    .|:|    .|::.|:.:|...||....|.|::..|::|.||||.|:|..|.:|  :|
  Fly    55 --------AIVD----CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EP 105

  Fly   312 HELELGRPQVVIVSPTRELAIQIFNEARKFA-FESYLKIGIVYGGTSFRHQNECITRGC-HVVIA 374
            .  :.....|:::..|||||.||..|..:|: :...:|:.:.:||.:.:...|.:..|. |:|:.
  Fly   106 S--DNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVG 168

  Fly   375 TPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEH--QTLMFSATFPE 437
            ||||:|..:....:..:..:..||||.|:||:   ..||||.:..:.....|  |.:|||||..:
  Fly   169 TPGRILALIRNKKLNLKLLKHFVLDECDKMLE---QLDMRRDVQEIFRSTPHGKQVMMFSATLSK 230

  Fly   438 EIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKY-------AKRSKLIEILSE-QADGTIV 494
            :|:.:..:|:::.:.|.:.      .:.|.|::.:.::       .|..||.|:|.. :.:..::
  Fly   231 DIRPVCKKFMQDPMEVYVD------DEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVI 289

  Fly   495 FVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIK 559
            ||::.:....|:..|:|:.||...||....|.:|....:.||:...::|:||::..||:||:.:.
  Fly   290 FVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVN 354

  Fly   560 HVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAI 601
            .|.|||||...|.|:||:.|.||.|..|.|.:|...|.|..|
  Fly   355 IVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKI 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 62/210 (30%)
DEXDc 260..467 CDD:214692 61/210 (29%)
Helicase_C 475..584 CDD:278689 38/116 (33%)
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 66/233 (28%)
SF2_C_DEAD 259..388 CDD:350174 41/128 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451348
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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